Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 AC105339.1-204ENST00000636249 355 ntBASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 AF228730.6-201ENST00000641497 218 ntBASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 AC084121.3-201ENST00000641716 218 ntBASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CHAMP1Q96JM3 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 AC113367.3-201ENST00000508316 1912 ntBASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CHAMP1Q96JM3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 LHX6-205ENST00000464484 666 ntTSL 2 BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 AC026979.3-201ENST00000607315 403 ntBASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 AC003101.2-201ENST00000612557 442 ntBASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 C20orf181-201ENST00000623918 480 ntBASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CHAMP1Q96JM3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 GRK6P1-201ENST00000400595 1711 ntBASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.9■□□□□ 0.46
CHAMP1Q96JM3 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms