Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 BX640514.1-201ENST00000583223 1918 ntBASIC13.76□□□□□ -0.21
RFT1Q96AA3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 MED15P5-201ENST00000423150 992 ntBASIC13.76□□□□□ -0.21
RFT1Q96AA3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 AC140113.2-201ENST00000604370 208 ntBASIC13.76□□□□□ -0.21
RFT1Q96AA3 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 AC136759.1-202ENST00000530858 2194 ntBASIC13.76□□□□□ -0.21
RFT1Q96AA3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RFT1Q96AA3 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.76□□□□□ -0.21
RFT1Q96AA3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 AL731571.1-201ENST00000617058 5428 ntBASIC13.75□□□□□ -0.21
RFT1Q96AA3 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 SPTSSB-204ENST00000617024 1292 ntBASIC13.75□□□□□ -0.21
RFT1Q96AA3 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
RFT1Q96AA3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.75□□□□□ -0.21
RFT1Q96AA3 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
RFT1Q96AA3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RFT1Q96AA3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms