Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT9Q92600 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CNOT9Q92600 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT9Q92600 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 SNX18-202ENST00000343017 3140 ntBASIC14.28□□□□□ -0.12
CNOT9Q92600 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CNOT9Q92600 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CNOT9Q92600 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CNOT9Q92600 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.28□□□□□ -0.12
CNOT9Q92600 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.28□□□□□ -0.12
CNOT9Q92600 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.28□□□□□ -0.12
CNOT9Q92600 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.28□□□□□ -0.12
CNOT9Q92600 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 AC055876.3-201ENST00000431496 288 ntBASIC14.28□□□□□ -0.12
CNOT9Q92600 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.28□□□□□ -0.12
CNOT9Q92600 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CNOT9Q92600 AL121723.1-201ENST00000445194 1519 ntBASIC14.28□□□□□ -0.12
CNOT9Q92600 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.28□□□□□ -0.12
CNOT9Q92600 ZNF890P-202ENST00000530367 1156 ntBASIC14.28□□□□□ -0.12
CNOT9Q92600 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CNOT9Q92600 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.28□□□□□ -0.12
CNOT9Q92600 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14.28□□□□□ -0.12
CNOT9Q92600 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.28□□□□□ -0.12
CNOT9Q92600 AC138649.4-201ENST00000612222 287 ntBASIC14.28□□□□□ -0.12
CNOT9Q92600 AC106028.4-201ENST00000614509 607 ntBASIC14.28□□□□□ -0.12
CNOT9Q92600 AC093512.1-201ENST00000617969 520 ntBASIC14.28□□□□□ -0.12
CNOT9Q92600 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 AC004461.2-201ENST00000629517 803 ntBASIC14.28□□□□□ -0.12
CNOT9Q92600 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CNOT9Q92600 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CNOT9Q92600 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.28□□□□□ -0.12
CNOT9Q92600 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CNOT9Q92600 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT9Q92600 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
CNOT9Q92600 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CNOT9Q92600 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.28□□□□□ -0.12
CNOT9Q92600 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CNOT9Q92600 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.27□□□□□ -0.12
CNOT9Q92600 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
CNOT9Q92600 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CNOT9Q92600 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.27□□□□□ -0.12
CNOT9Q92600 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC14.27□□□□□ -0.12
CNOT9Q92600 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.27□□□□□ -0.12
CNOT9Q92600 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 AC104581.4-201ENST00000623126 3052 ntBASIC14.27□□□□□ -0.12
CNOT9Q92600 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.27□□□□□ -0.12
CNOT9Q92600 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.27□□□□□ -0.12
CNOT9Q92600 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CNOT9Q92600 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT9Q92600 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT9Q92600 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT9Q92600 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.27□□□□□ -0.13
CNOT9Q92600 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.27□□□□□ -0.13
CNOT9Q92600 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.27□□□□□ -0.13
CNOT9Q92600 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT9Q92600 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.27□□□□□ -0.13
CNOT9Q92600 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT9Q92600 AC009477.1-201ENST00000452936 217 ntBASIC14.27□□□□□ -0.13
CNOT9Q92600 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.27□□□□□ -0.13
CNOT9Q92600 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
CNOT9Q92600 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.27□□□□□ -0.13
CNOT9Q92600 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
CNOT9Q92600 AC009407.1-201ENST00000568958 598 ntBASIC14.27□□□□□ -0.13
CNOT9Q92600 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT9Q92600 LINC00528-201ENST00000600723 2160 ntBASIC14.27□□□□□ -0.13
CNOT9Q92600 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CNOT9Q92600 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms