Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 ENPP7P8-202ENST00000527856 1345 ntBASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 AL137783.1-201ENST00000623494 1896 ntBASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 AC106827.1-201ENST00000366454 431 ntBASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 AP001184.1-201ENST00000637936 376 ntBASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 KRT17P5-201ENST00000332088 839 ntBASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 KRT17P4-201ENST00000429445 819 ntBASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
ALMS1Q8TCU4 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 FTX-216ENST00000638985 1367 ntTSL 5 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 MIR3180-2-201ENST00000581748 88 ntBASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 FAM32A-204ENST00000588367 798 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 ILF3-AS1-201ENST00000591501 1983 ntBASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 DBP-202ENST00000593500 712 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 NHP2-202ENST00000314397 599 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 MBP-201ENST00000354542 575 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 AL627230.2-201ENST00000613254 655 ntBASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
ALMS1Q8TCU4 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms