Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 GLI4-203ENST00000517468 963 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 AC092552.1-201ENST00000547243 906 ntBASIC12.49□□□□□ -0.41
LINC00311Q8N616 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 AC123567.1-201ENST00000548294 1261 ntBASIC12.49□□□□□ -0.41
LINC00311Q8N616 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 AL132655.2-201ENST00000596276 594 ntBASIC12.49□□□□□ -0.41
LINC00311Q8N616 LINC02560-201ENST00000596379 459 ntBASIC12.49□□□□□ -0.41
LINC00311Q8N616 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 AC007431.3-201ENST00000623221 587 ntBASIC12.49□□□□□ -0.41
LINC00311Q8N616 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 PRSS30P-206ENST00000641773 873 ntBASIC12.49□□□□□ -0.41
LINC00311Q8N616 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 TNRC18P2-201ENST00000417666 2714 ntBASIC12.49□□□□□ -0.41
LINC00311Q8N616 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 AC013726.1-201ENST00000563747 2285 ntBASIC12.49□□□□□ -0.41
LINC00311Q8N616 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
LINC00311Q8N616 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
LINC00311Q8N616 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 AC007541.1-201ENST00000570282 1469 ntBASIC12.48□□□□□ -0.41
LINC00311Q8N616 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.48□□□□□ -0.41
LINC00311Q8N616 LILRP1-201ENST00000444199 1370 ntBASIC12.48□□□□□ -0.41
LINC00311Q8N616 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
LINC00311Q8N616 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 RN7SL204P-201ENST00000582831 262 ntBASIC12.48□□□□□ -0.41
LINC00311Q8N616 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
LINC00311Q8N616 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms