Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 AC093512.1-201ENST00000617969 520 ntBASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 AL390754.1-201ENST00000619088 582 ntBASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 AC004461.2-201ENST00000629517 803 ntBASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 AL645728.2-202ENST00000641679 227 ntBASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 AL121723.1-201ENST00000445194 1519 ntBASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
TTC9CQ8N5M4 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 AL512638.1-201ENST00000457493 794 ntBASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 AC092183.1-201ENST00000469884 875 ntBASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 MEIS3P1-201ENST00000495167 958 ntBASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 AC009407.1-201ENST00000568958 598 ntBASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 AC022144.1-201ENST00000602255 1580 ntBASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 AC023024.2-201ENST00000623561 1993 ntBASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
TTC9CQ8N5M4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TTC9CQ8N5M4 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms