Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 ZBED1P1-201ENST00000502364 1930 ntBASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.5□□□□□ -0.09
DEPDC4Q8N2C3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 AC005912.2-201ENST00000619492 2400 ntBASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 LINC01090-202ENST00000434418 560 ntTSL 5 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 AC109635.5-201ENST00000533593 962 ntBASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 AC025678.2-201ENST00000562061 970 ntBASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 ST20-AS1-201ENST00000560255 4223 ntBASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.49□□□□□ -0.09
DEPDC4Q8N2C3 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 AC004461.1-201ENST00000412461 403 ntBASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 TSEN15P1-201ENST00000423257 515 ntBASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 AL592309.1-201ENST00000443127 649 ntBASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
DEPDC4Q8N2C3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms