Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 HNRNPA1P40-201ENST00000426371 1278 ntBASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 AC027796.2-201ENST00000575326 344 ntBASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 AC025181.2-201ENST00000606994 802 ntBASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 MYO15B-237ENST00000642007 4893 ntBASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC14.61□□□□□ -0.07
CCDC116Q8IYX3 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CCDC116Q8IYX3 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC116Q8IYX3 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC116Q8IYX3 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC116Q8IYX3 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC116Q8IYX3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
CCDC116Q8IYX3 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CCDC116Q8IYX3 AGAP7P-201ENST00000582299 2062 ntBASIC14.59□□□□□ -0.07
CCDC116Q8IYX3 AGAP14-201ENST00000624701 2060 ntBASIC14.59□□□□□ -0.07
CCDC116Q8IYX3 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.59□□□□□ -0.07
CCDC116Q8IYX3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms