Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TRIM42Q8IWZ5 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 AL139010.1-201ENST00000454878 894 ntBASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 RNA5SP416-201ENST00000516838 111 ntBASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 REXO1L2P-201ENST00000425429 2069 ntBASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.5■□□□□ 0.07
TRIM42Q8IWZ5 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 HNRNPUP1-201ENST00000554987 333 ntBASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 AC097359.3-201ENST00000603982 1210 ntBASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 AC064836.3-201ENST00000607928 673 ntBASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
TRIM42Q8IWZ5 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 AL136982.4-201ENST00000437689 1740 ntBASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TRIM42Q8IWZ5 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms