Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 AC007787.1-201ENST00000588095 1583 ntBASIC17.16■□□□□ 0.34
TRIM50Q86XT4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 AC006001.1-201ENST00000325130 474 ntBASIC17.16■□□□□ 0.34
TRIM50Q86XT4 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 AL158070.2-201ENST00000623713 1621 ntBASIC17.16■□□□□ 0.34
TRIM50Q86XT4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 AL162727.3-201ENST00000635661 2787 ntBASIC17.16■□□□□ 0.34
TRIM50Q86XT4 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRIM50Q86XT4 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 RN7SL560P-201ENST00000577943 264 ntBASIC17.15■□□□□ 0.34
TRIM50Q86XT4 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 ETV2-208ENST00000621247 941 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC17.15■□□□□ 0.34
TRIM50Q86XT4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 AP005117.1-202ENST00000581724 1908 ntBASIC17.15■□□□□ 0.34
TRIM50Q86XT4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.15■□□□□ 0.34
TRIM50Q86XT4 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
TRIM50Q86XT4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.14■□□□□ 0.34
TRIM50Q86XT4 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRIM50Q86XT4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRIM50Q86XT4 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM50Q86XT4 MIR1202-201ENST00000408529 83 ntBASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms