Protein–RNA interactions for Protein: Q7Z3S7

CACNA2D4, Voltage-dependent calcium channel subunit alpha-2/delta-4, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4Q7Z3S7 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D4Q7Z3S7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D4Q7Z3S7 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D4Q7Z3S7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D4Q7Z3S7 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D4Q7Z3S7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CACNA2D4Q7Z3S7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CACNA2D4Q7Z3S7 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC17.04■□□□□ 0.32
CACNA2D4Q7Z3S7 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 COQ6-210ENST00000554920 649 ntTSL 3 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 AC018529.1-201ENST00000613063 361 ntBASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 AL390754.1-201ENST00000619088 582 ntBASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 AC106881.1-201ENST00000605849 3329 ntBASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA2D4Q7Z3S7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 GSN-203ENST00000373808 2664 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 AC003101.2-201ENST00000612557 442 ntBASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.02■□□□□ 0.32
CACNA2D4Q7Z3S7 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms