Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 FABP5-202ENST00000396359 986 ntTSL 5 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
RAPH1Q70E73 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC15.6■□□□□ 0.09
RAPH1Q70E73 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 AC005912.2-201ENST00000619492 2400 ntBASIC15.59■□□□□ 0.09
RAPH1Q70E73 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 RBM39-205ENST00000397370 612 ntTSL 2 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
RAPH1Q70E73 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
RAPH1Q70E73 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
RAPH1Q70E73 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAPH1Q70E73 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC15.58■□□□□ 0.09
RAPH1Q70E73 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAPH1Q70E73 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAPH1Q70E73 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAPH1Q70E73 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.58■□□□□ 0.09
RAPH1Q70E73 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAPH1Q70E73 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
RAPH1Q70E73 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
RAPH1Q70E73 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
RAPH1Q70E73 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.58■□□□□ 0.09
RAPH1Q70E73 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.09
RAPH1Q70E73 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
RAPH1Q70E73 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
RAPH1Q70E73 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms