Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 OR4K13-203ENST00000641904 5684 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 SNRK-201ENST00000296088 5183 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 AC005332.1-201ENST00000577698 1310 ntBASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 RRBP1-201ENST00000246043 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
KCNIP4Q6PIL6 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 AC127383.1-201ENST00000444697 1800 ntBASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 ADCY7-202ENST00000394697 6213 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 TP73-203ENST00000357733 4899 ntTSL 5 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 AL160237.2-201ENST00000556165 472 ntBASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 AC069148.1-201ENST00000608741 768 ntBASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 AL353801.3-201ENST00000609898 542 ntBASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 AC004899.2-201ENST00000622993 3860 ntBASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KCNIP4Q6PIL6 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 BRPF3-201ENST00000339717 4820 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
KCNIP4Q6PIL6 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms