Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC62Q6P9F0 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 MIR326-201ENST00000362220 95 ntBASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 MIR1202-201ENST00000408529 83 ntBASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC62Q6P9F0 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 AC004066.1-201ENST00000502488 802 ntBASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 C2orf69P2-201ENST00000562032 1123 ntBASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 AC244093.1-201ENST00000610837 814 ntBASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 AC091271.1-201ENST00000611877 1162 ntBASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 AL133338.1-201ENST00000565695 1517 ntBASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 AL596257.1-201ENST00000641463 2694 ntBASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 AL158070.2-201ENST00000623713 1621 ntBASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CCDC62Q6P9F0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CCDC62Q6P9F0 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms