Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 SPCS2P4-201ENST00000436160 681 ntBASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AC098859.1-201ENST00000502915 1238 ntBASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AL138918.1-201ENST00000568306 659 ntBASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AC004835.2-201ENST00000603762 682 ntBASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AC023511.2-201ENST00000618803 211 ntBASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AC105339.1-204ENST00000636249 355 ntBASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AC079781.4-201ENST00000641908 219 ntBASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AL592424.1-201ENST00000563624 1536 ntBASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 REXO1L8P-201ENST00000604378 1897 ntBASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AC131902.2-201ENST00000566892 2172 ntBASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 AC136621.1-201ENST00000624017 2304 ntBASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
TMEM53Q6P2H8 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 AC024267.1-201ENST00000582320 895 ntBASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 AC022145.2-201ENST00000598203 171 ntBASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TMEM53Q6P2H8 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TMEM53Q6P2H8 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms