Protein–RNA interactions for Protein: Q6P161

MRPL54, 39S ribosomal protein L54, mitochondrial, humanhuman

Known RBP Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54Q6P161 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
MRPL54Q6P161 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 NSUN5P1-202ENST00000421140 1535 ntBASIC11.73□□□□□ -0.53
MRPL54Q6P161 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 NSUN5P2-203ENST00000457352 1529 ntBASIC11.73□□□□□ -0.53
MRPL54Q6P161 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 CDV3-207ENST00000508481 661 ntTSL 3 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 AC012569.1-201ENST00000591191 1524 ntBASIC11.73□□□□□ -0.53
MRPL54Q6P161 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 AC018529.2-202ENST00000611482 3087 ntBASIC11.73□□□□□ -0.53
MRPL54Q6P161 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
MRPL54Q6P161 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 LSS-211ENST00000522411 2523 ntTSL 2 BASIC11.73□□□□□ -0.53
MRPL54Q6P161 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 PCDHGB8P-201ENST00000502926 1973 ntBASIC11.72□□□□□ -0.53
MRPL54Q6P161 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.72□□□□□ -0.53
MRPL54Q6P161 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
MRPL54Q6P161 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 GGTLC5P-201ENST00000617623 998 ntBASIC11.72□□□□□ -0.53
MRPL54Q6P161 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 AL589182.2-201ENST00000619332 1049 ntBASIC11.72□□□□□ -0.53
MRPL54Q6P161 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC11.72□□□□□ -0.53
MRPL54Q6P161 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms