Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
CDKAL1Q5VV42 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
CDKAL1Q5VV42 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CDKAL1Q5VV42 AC027601.5-201ENST00000624065 2482 ntBASIC16.85■□□□□ 0.29
CDKAL1Q5VV42 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKAL1Q5VV42 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKAL1Q5VV42 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKAL1Q5VV42 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CDKAL1Q5VV42 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 GAPDHP40-201ENST00000505218 1006 ntBASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 ZNF890P-202ENST00000530367 1156 ntBASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 AL844908.2-201ENST00000609461 460 ntBASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
CDKAL1Q5VV42 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CDKAL1Q5VV42 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDKAL1Q5VV42 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CDKAL1Q5VV42 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.29
CDKAL1Q5VV42 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
CDKAL1Q5VV42 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 AL139400.1-201ENST00000366220 510 ntBASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 AC015802.1-201ENST00000588104 1449 ntBASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.83■□□□□ 0.28
CDKAL1Q5VV42 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKAL1Q5VV42 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKAL1Q5VV42 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC16.82■□□□□ 0.28
CDKAL1Q5VV42 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.82■□□□□ 0.28
CDKAL1Q5VV42 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKAL1Q5VV42 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKAL1Q5VV42 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CDKAL1Q5VV42 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKAL1Q5VV42 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CDKAL1Q5VV42 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CDKAL1Q5VV42 AC041040.2-201ENST00000622926 2899 ntBASIC16.82■□□□□ 0.28
CDKAL1Q5VV42 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms