Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF20Q5VTR2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF20Q5VTR2 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF20Q5VTR2 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF20Q5VTR2 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF20Q5VTR2 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF20Q5VTR2 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF20Q5VTR2 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
RNF20Q5VTR2 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF20Q5VTR2 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF20Q5VTR2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF20Q5VTR2 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.46■□□□□ 0.54
RNF20Q5VTR2 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
RNF20Q5VTR2 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC18.45■□□□□ 0.54
RNF20Q5VTR2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 AC104457.1-201ENST00000401024 814 ntBASIC18.45■□□□□ 0.54
RNF20Q5VTR2 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 AC005498.2-205ENST00000593218 784 ntBASIC18.45■□□□□ 0.54
RNF20Q5VTR2 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 ZBTB45P1-201ENST00000452761 1456 ntBASIC18.45■□□□□ 0.54
RNF20Q5VTR2 AC012508.2-201ENST00000567613 1472 ntBASIC18.45■□□□□ 0.54
RNF20Q5VTR2 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF20Q5VTR2 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 SPDYE18-201ENST00000510091 1050 ntBASIC18.44■□□□□ 0.54
RNF20Q5VTR2 RNA5SP421-201ENST00000516864 134 ntBASIC18.44■□□□□ 0.54
RNF20Q5VTR2 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 AL391069.4-201ENST00000609583 481 ntBASIC18.44■□□□□ 0.54
RNF20Q5VTR2 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 FAM45BP-202ENST00000592932 1624 ntBASIC18.44■□□□□ 0.54
RNF20Q5VTR2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
RNF20Q5VTR2 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.43■□□□□ 0.54
RNF20Q5VTR2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms