Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 AF274858.1-201ENST00000406288 372 ntBASIC14.72□□□□□ -0.05
RIF1Q5UIP0 FTH1P22-201ENST00000456305 520 ntBASIC14.72□□□□□ -0.05
RIF1Q5UIP0 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 Z98259.2-201ENST00000641583 609 ntBASIC14.72□□□□□ -0.05
RIF1Q5UIP0 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.72□□□□□ -0.05
RIF1Q5UIP0 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 JPT2-203ENST00000382711 894 ntTSL 4 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 STK16-203ENST00000409516 895 ntTSL 2 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 AL807761.2-201ENST00000422849 729 ntBASIC14.71□□□□□ -0.05
RIF1Q5UIP0 RN7SL81P-201ENST00000493781 261 ntBASIC14.71□□□□□ -0.05
RIF1Q5UIP0 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 LINC01783-202ENST00000614408 828 ntBASIC14.71□□□□□ -0.05
RIF1Q5UIP0 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 BX284668.2-205ENST00000619677 828 ntBASIC14.71□□□□□ -0.05
RIF1Q5UIP0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 AL672207.1-201ENST00000328462 1570 ntBASIC14.71□□□□□ -0.05
RIF1Q5UIP0 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 AC023141.7-201ENST00000430646 407 ntBASIC14.71□□□□□ -0.05
RIF1Q5UIP0 AC012441.2-201ENST00000444843 739 ntBASIC14.71□□□□□ -0.05
RIF1Q5UIP0 LINC01875-201ENST00000454477 660 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 AC108724.1-201ENST00000481669 352 ntBASIC14.71□□□□□ -0.05
RIF1Q5UIP0 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RIF1Q5UIP0 AC011462.4-201ENST00000616866 449 ntBASIC14.71□□□□□ -0.05
RIF1Q5UIP0 AL603764.1-201ENST00000636452 321 ntBASIC14.71□□□□□ -0.05
RIF1Q5UIP0 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RIF1Q5UIP0 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
RIF1Q5UIP0 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
RIF1Q5UIP0 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RIF1Q5UIP0 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
RIF1Q5UIP0 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RIF1Q5UIP0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RIF1Q5UIP0 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RIF1Q5UIP0 LINC01165-201ENST00000445190 1623 ntBASIC14.7□□□□□ -0.06
RIF1Q5UIP0 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms