Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC93Q567U6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC93Q567U6 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC93Q567U6 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC93Q567U6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC93Q567U6 ACTG1P2-201ENST00000415776 1125 ntBASIC18.82■□□□□ 0.6
CCDC93Q567U6 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 ACTG1P11-201ENST00000425411 1125 ntBASIC18.82■□□□□ 0.6
CCDC93Q567U6 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 AC021723.1-201ENST00000486306 515 ntBASIC18.82■□□□□ 0.6
CCDC93Q567U6 AC004066.1-201ENST00000502488 802 ntBASIC18.82■□□□□ 0.6
CCDC93Q567U6 AC100850.1-201ENST00000506768 649 ntBASIC18.82■□□□□ 0.6
CCDC93Q567U6 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 AC022748.3-201ENST00000621828 275 ntBASIC18.82■□□□□ 0.6
CCDC93Q567U6 ZNF596-213ENST00000640035 1163 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC93Q567U6 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC93Q567U6 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC93Q567U6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC93Q567U6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.82■□□□□ 0.6
CCDC93Q567U6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCDC93Q567U6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 AC092850.2-201ENST00000623821 2697 ntBASIC18.81■□□□□ 0.6
CCDC93Q567U6 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 DPM3-202ENST00000368399 517 ntBASIC18.81■□□□□ 0.6
CCDC93Q567U6 LSM5-207ENST00000410044 687 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 EIF3FP3-201ENST00000434851 1086 ntBASIC18.81■□□□□ 0.6
CCDC93Q567U6 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 AC106794.1-201ENST00000506935 792 ntBASIC18.81■□□□□ 0.6
CCDC93Q567U6 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 AC026740.1-201ENST00000607068 791 ntBASIC18.81■□□□□ 0.6
CCDC93Q567U6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC93Q567U6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC93Q567U6 AC007787.1-201ENST00000588095 1583 ntBASIC18.81■□□□□ 0.6
CCDC93Q567U6 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC93Q567U6 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC93Q567U6 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC93Q567U6 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC93Q567U6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC93Q567U6 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC93Q567U6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC93Q567U6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC93Q567U6 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC18.8■□□□□ 0.6
CCDC93Q567U6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC93Q567U6 AC106820.3-201ENST00000561653 397 ntBASIC18.8■□□□□ 0.6
CCDC93Q567U6 AC013355.1-201ENST00000562625 723 ntBASIC18.8■□□□□ 0.6
CCDC93Q567U6 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC93Q567U6 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC93Q567U6 AL158070.2-201ENST00000623713 1621 ntBASIC18.8■□□□□ 0.6
CCDC93Q567U6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC93Q567U6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC93Q567U6 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC93Q567U6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC93Q567U6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
CCDC93Q567U6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC93Q567U6 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC93Q567U6 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC93Q567U6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC93Q567U6 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms