Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 STX1A-203ENST00000395155 783 ntTSL 2 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 AC023024.2-201ENST00000623561 1993 ntBASIC21.15■□□□□ 0.98
CDCA8Q53HL2 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC21.15■□□□□ 0.98
CDCA8Q53HL2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDCA8Q53HL2 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDCA8Q53HL2 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDCA8Q53HL2 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDCA8Q53HL2 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CDCA8Q53HL2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC21.14■□□□□ 0.98
CDCA8Q53HL2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDCA8Q53HL2 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CDCA8Q53HL2 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 AC006001.1-201ENST00000325130 474 ntBASIC21.14■□□□□ 0.97
CDCA8Q53HL2 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 ETV2-208ENST00000621247 941 ntTSL 5 BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 ENPP7P14-201ENST00000621765 1040 ntBASIC21.14■□□□□ 0.97
CDCA8Q53HL2 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDCA8Q53HL2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 REXO1L5P-201ENST00000622260 2098 ntBASIC21.13■□□□□ 0.97
CDCA8Q53HL2 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDCA8Q53HL2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDCA8Q53HL2 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms