Protein–RNA interactions for Protein: Q3BBV0

NBPF1, Neuroblastoma breakpoint family member 1, humanhuman

Predictions only

Length 1,214 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1Q3BBV0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 SNX21-203ENST00000372541 771 ntTSL 2 BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 EMC4-209ENST00000559421 497 ntTSL 2 BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 AC091271.1-201ENST00000611877 1162 ntBASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 AC138466.3-201ENST00000619983 221 ntBASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 ACE-204ENST00000428043 5120 ntTSL 2 BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC21.47■■□□□ 1.03
NBPF1Q3BBV0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 RGS5-214ENST00000429865 754 ntTSL 3 BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 MESTP3-201ENST00000503460 968 ntBASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 COX5BP1-201ENST00000507622 393 ntBASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 RNF41-210ENST00000552244 716 ntTSL 3 BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 AL096828.3-201ENST00000615354 462 ntBASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 AC105917.1-201ENST00000506637 2539 ntBASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NBPF1Q3BBV0 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
NBPF1Q3BBV0 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.03
NBPF1Q3BBV0 AC012508.2-201ENST00000567613 1472 ntBASIC21.45■■□□□ 1.03
NBPF1Q3BBV0 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC21.45■■□□□ 1.03
NBPF1Q3BBV0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 Z93015.1-201ENST00000451718 390 ntBASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NBPF1Q3BBV0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 TISP43-201ENST00000409793 538 ntTSL 4 BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC21.44■■□□□ 1.02
NBPF1Q3BBV0 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms