Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 AC006058.4-201ENST00000624016 1670 ntBASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 AC018735.1-201ENST00000437208 1502 ntBASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.49■□□□□ 0.23
CTC1Q2NKJ3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 POU5F1P6-201ENST00000466990 990 ntBASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 RNA5SP486-201ENST00000515961 83 ntBASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 HNRNPUP1-201ENST00000554987 333 ntBASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 AC015910.1-201ENST00000579400 975 ntBASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 AC006453.4-201ENST00000636949 1252 ntBASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CTC1Q2NKJ3 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 AC253536.4-201ENST00000440539 267 ntBASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 TSACC-208ENST00000481479 741 ntTSL 2 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 AC107373.2-201ENST00000607735 490 ntBASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CTC1Q2NKJ3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms