Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 AC244157.2-201ENST00000616239 1006 ntBASIC18.3■□□□□ 0.52
PDS5AQ29RF7 AL137783.1-201ENST00000623494 1896 ntBASIC18.3■□□□□ 0.52
PDS5AQ29RF7 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 C18orf15-201ENST00000623680 2534 ntBASIC18.3■□□□□ 0.52
PDS5AQ29RF7 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
PDS5AQ29RF7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 MIR1247-201ENST00000408206 136 ntBASIC18.29■□□□□ 0.52
PDS5AQ29RF7 RN7SKP175-201ENST00000408472 289 ntBASIC18.29■□□□□ 0.52
PDS5AQ29RF7 SERF2-209ENST00000409646 559 ntTSL 4 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 CD74-212ENST00000524315 584 ntTSL 5 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 AL096828.3-201ENST00000615354 462 ntBASIC18.29■□□□□ 0.52
PDS5AQ29RF7 AL008638.5-201ENST00000623814 1298 ntBASIC18.29■□□□□ 0.52
PDS5AQ29RF7 ABBA01031663.1-201ENST00000635630 790 ntBASIC18.29■□□□□ 0.52
PDS5AQ29RF7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PDS5AQ29RF7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 AC004945.1-201ENST00000416738 983 ntBASIC18.28■□□□□ 0.52
PDS5AQ29RF7 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
PDS5AQ29RF7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 LILRP1-201ENST00000444199 1370 ntBASIC18.27■□□□□ 0.52
PDS5AQ29RF7 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 PES1-204ENST00000402284 2144 ntTSL 5 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 TISP43-201ENST00000409793 538 ntTSL 4 BASIC18.27■□□□□ 0.52
PDS5AQ29RF7 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms