Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.15□□□□□ -0.14
LTBQ06643 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
LTBQ06643 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.15□□□□□ -0.14
LTBQ06643 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
LTBQ06643 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBQ06643 PCDHA3-202ENST00000532566 4594 ntBASIC14.14□□□□□ -0.15
LTBQ06643 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBQ06643 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.14□□□□□ -0.15
LTBQ06643 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
LTBQ06643 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBQ06643 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBQ06643 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
LTBQ06643 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBQ06643 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBQ06643 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBQ06643 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBQ06643 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.14□□□□□ -0.15
LTBQ06643 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.14□□□□□ -0.15
LTBQ06643 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
LTBQ06643 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.14□□□□□ -0.15
LTBQ06643 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.14□□□□□ -0.15
LTBQ06643 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.14□□□□□ -0.15
LTBQ06643 AC073592.8-201ENST00000624126 511 ntBASIC14.14□□□□□ -0.15
LTBQ06643 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC14.14□□□□□ -0.15
LTBQ06643 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
LTBQ06643 AC126365.1-201ENST00000578585 1514 ntBASIC14.14□□□□□ -0.15
LTBQ06643 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.14□□□□□ -0.15
LTBQ06643 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.14□□□□□ -0.15
LTBQ06643 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
LTBQ06643 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
LTBQ06643 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.14□□□□□ -0.15
LTBQ06643 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.13□□□□□ -0.15
LTBQ06643 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBQ06643 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.13□□□□□ -0.15
LTBQ06643 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBQ06643 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBQ06643 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBQ06643 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.13□□□□□ -0.15
LTBQ06643 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBQ06643 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.13□□□□□ -0.15
LTBQ06643 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.13□□□□□ -0.15
LTBQ06643 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC14.13□□□□□ -0.15
LTBQ06643 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBQ06643 SERBP1P3-201ENST00000459980 809 ntBASIC14.13□□□□□ -0.15
LTBQ06643 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.13□□□□□ -0.15
LTBQ06643 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBQ06643 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.13□□□□□ -0.15
LTBQ06643 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 LINC01115-203ENST00000606068 577 ntBASIC14.13□□□□□ -0.15
LTBQ06643 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.13□□□□□ -0.15
LTBQ06643 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBQ06643 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBQ06643 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.13□□□□□ -0.15
LTBQ06643 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
LTBQ06643 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
LTBQ06643 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
LTBQ06643 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms