Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 BASP1P1-201ENST00000430708 665 ntBASIC17.26■□□□□ 0.35
ASIC1P78348 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.26■□□□□ 0.35
ASIC1P78348 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
ASIC1P78348 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC17.26■□□□□ 0.35
ASIC1P78348 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC17.26■□□□□ 0.35
ASIC1P78348 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
ASIC1P78348 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.26■□□□□ 0.35
ASIC1P78348 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.26■□□□□ 0.35
ASIC1P78348 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.26■□□□□ 0.35
ASIC1P78348 AL158212.4-201ENST00000624062 1286 ntBASIC17.26■□□□□ 0.35
ASIC1P78348 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ASIC1P78348 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC17.26■□□□□ 0.35
ASIC1P78348 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.26■□□□□ 0.35
ASIC1P78348 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
ASIC1P78348 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
ASIC1P78348 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
ASIC1P78348 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ASIC1P78348 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.25■□□□□ 0.35
ASIC1P78348 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC17.25■□□□□ 0.35
ASIC1P78348 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ASIC1P78348 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC17.25■□□□□ 0.35
ASIC1P78348 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
ASIC1P78348 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
ASIC1P78348 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.25■□□□□ 0.35
ASIC1P78348 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC17.25■□□□□ 0.35
ASIC1P78348 MEIS3P1-201ENST00000495167 958 ntBASIC17.25■□□□□ 0.35
ASIC1P78348 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC17.25■□□□□ 0.35
ASIC1P78348 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.25■□□□□ 0.35
ASIC1P78348 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.25■□□□□ 0.35
ASIC1P78348 SRD5A3P1-201ENST00000603021 949 ntBASIC17.25■□□□□ 0.35
ASIC1P78348 AC000095.1-201ENST00000603208 874 ntBASIC17.25■□□□□ 0.35
ASIC1P78348 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
ASIC1P78348 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC17.25■□□□□ 0.35
ASIC1P78348 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
ASIC1P78348 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 ZBED1P1-201ENST00000502364 1930 ntBASIC17.25■□□□□ 0.35
ASIC1P78348 WASH3P-207ENST00000560956 1394 ntBASIC17.25■□□□□ 0.35
ASIC1P78348 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.25■□□□□ 0.35
ASIC1P78348 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC17.25■□□□□ 0.35
ASIC1P78348 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
ASIC1P78348 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC17.25■□□□□ 0.35
ASIC1P78348 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.24■□□□□ 0.35
ASIC1P78348 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.24■□□□□ 0.35
ASIC1P78348 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.24■□□□□ 0.35
ASIC1P78348 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
ASIC1P78348 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.24■□□□□ 0.35
ASIC1P78348 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC17.24■□□□□ 0.35
ASIC1P78348 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.24■□□□□ 0.35
ASIC1P78348 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
ASIC1P78348 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.24■□□□□ 0.35
ASIC1P78348 RASL12-203ENST00000434605 982 ntTSL 2 BASIC17.24■□□□□ 0.35
ASIC1P78348 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.24■□□□□ 0.35
ASIC1P78348 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 DUT-210ENST00000559935 569 ntTSL 3 BASIC17.24■□□□□ 0.35
ASIC1P78348 AC104794.3-201ENST00000566840 1248 ntBASIC17.24■□□□□ 0.35
ASIC1P78348 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.24■□□□□ 0.35
ASIC1P78348 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
ASIC1P78348 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC17.24■□□□□ 0.35
ASIC1P78348 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms