Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC20.33■□□□□ 0.85
ZC3H6P61129 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H6P61129 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H6P61129 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H6P61129 RN7SKP175-201ENST00000408472 289 ntBASIC20.33■□□□□ 0.85
ZC3H6P61129 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC20.33■□□□□ 0.85
ZC3H6P61129 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC20.33■□□□□ 0.85
ZC3H6P61129 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H6P61129 AL353637.1-201ENST00000451571 732 ntBASIC20.33■□□□□ 0.85
ZC3H6P61129 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H6P61129 HNRNPA1P36-201ENST00000521313 955 ntBASIC20.33■□□□□ 0.85
ZC3H6P61129 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC20.33■□□□□ 0.85
ZC3H6P61129 CFL1-206ENST00000527344 962 ntTSL 2 BASIC20.33■□□□□ 0.85
ZC3H6P61129 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
ZC3H6P61129 AC242376.1-201ENST00000559033 726 ntBASIC20.33■□□□□ 0.85
ZC3H6P61129 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
ZC3H6P61129 AC103691.2-201ENST00000618824 433 ntBASIC20.33■□□□□ 0.85
ZC3H6P61129 AL136295.7-201ENST00000619226 1200 ntBASIC20.33■□□□□ 0.85
ZC3H6P61129 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ZC3H6P61129 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H6P61129 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H6P61129 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.84
ZC3H6P61129 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.33■□□□□ 0.84
ZC3H6P61129 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC20.33■□□□□ 0.84
ZC3H6P61129 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
ZC3H6P61129 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC20.33■□□□□ 0.84
ZC3H6P61129 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H6P61129 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H6P61129 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
ZC3H6P61129 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H6P61129 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ZC3H6P61129 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC20.32■□□□□ 0.84
ZC3H6P61129 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC20.32■□□□□ 0.84
ZC3H6P61129 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC20.32■□□□□ 0.84
ZC3H6P61129 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
ZC3H6P61129 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
ZC3H6P61129 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.32■□□□□ 0.84
ZC3H6P61129 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
ZC3H6P61129 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 PCDHA14-201ENST00000506751 2298 ntBASIC20.32■□□□□ 0.84
ZC3H6P61129 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC20.32■□□□□ 0.84
ZC3H6P61129 AC098935.1-201ENST00000446057 611 ntBASIC20.32■□□□□ 0.84
ZC3H6P61129 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC20.32■□□□□ 0.84
ZC3H6P61129 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC20.32■□□□□ 0.84
ZC3H6P61129 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC20.32■□□□□ 0.84
ZC3H6P61129 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC20.32■□□□□ 0.84
ZC3H6P61129 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC20.32■□□□□ 0.84
ZC3H6P61129 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 MTHFR-217ENST00000641820 1569 ntBASIC20.32■□□□□ 0.84
ZC3H6P61129 TNRC18P3-201ENST00000441896 2691 ntBASIC20.32■□□□□ 0.84
ZC3H6P61129 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC20.32■□□□□ 0.84
ZC3H6P61129 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZC3H6P61129 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H6P61129 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
ZC3H6P61129 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H6P61129 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H6P61129 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H6P61129 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
ZC3H6P61129 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H6P61129 SHC1P1-201ENST00000425230 1745 ntBASIC20.31■□□□□ 0.84
ZC3H6P61129 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC20.31■□□□□ 0.84
ZC3H6P61129 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H6P61129 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H6P61129 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H6P61129 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC20.31■□□□□ 0.84
ZC3H6P61129 AC114501.1-201ENST00000445949 172 ntBASIC20.31■□□□□ 0.84
ZC3H6P61129 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC20.31■□□□□ 0.84
ZC3H6P61129 RN7SL181P-201ENST00000462921 277 ntBASIC20.31■□□□□ 0.84
ZC3H6P61129 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
ZC3H6P61129 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC20.31■□□□□ 0.84
ZC3H6P61129 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ZC3H6P61129 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H6P61129 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
ZC3H6P61129 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.31■□□□□ 0.84
ZC3H6P61129 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.31■□□□□ 0.84
ZC3H6P61129 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H6P61129 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H6P61129 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZC3H6P61129 AC020910.5-201ENST00000623668 1865 ntBASIC20.3■□□□□ 0.84
ZC3H6P61129 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC20.3■□□□□ 0.84
ZC3H6P61129 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC20.3■□□□□ 0.84
ZC3H6P61129 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC20.3■□□□□ 0.84
ZC3H6P61129 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms