Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.18□□□□□ -0.14
CDC42P60953 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 BEND3P1-201ENST00000421591 1944 ntBASIC14.18□□□□□ -0.14
CDC42P60953 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
CDC42P60953 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.18□□□□□ -0.14
CDC42P60953 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC14.18□□□□□ -0.14
CDC42P60953 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.18□□□□□ -0.14
CDC42P60953 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.18□□□□□ -0.14
CDC42P60953 AC068137.2-201ENST00000605408 478 ntBASIC14.18□□□□□ -0.14
CDC42P60953 AC004877.2-201ENST00000623941 599 ntBASIC14.18□□□□□ -0.14
CDC42P60953 AC148477.8-201ENST00000624298 468 ntBASIC14.18□□□□□ -0.14
CDC42P60953 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 FOXO1B-201ENST00000504678 1527 ntBASIC14.18□□□□□ -0.14
CDC42P60953 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.18□□□□□ -0.14
CDC42P60953 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.18□□□□□ -0.14
CDC42P60953 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.18□□□□□ -0.14
CDC42P60953 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC14.18□□□□□ -0.14
CDC42P60953 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC14.18□□□□□ -0.14
CDC42P60953 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC14.18□□□□□ -0.14
CDC42P60953 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.18□□□□□ -0.14
CDC42P60953 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
CDC42P60953 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC14.17□□□□□ -0.14
CDC42P60953 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.17□□□□□ -0.14
CDC42P60953 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.17□□□□□ -0.14
CDC42P60953 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.17□□□□□ -0.14
CDC42P60953 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDC42P60953 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.17□□□□□ -0.14
CDC42P60953 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.17□□□□□ -0.14
CDC42P60953 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 HSPA7-201ENST00000445535 1927 ntBASIC14.17□□□□□ -0.14
CDC42P60953 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDC42P60953 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
CDC42P60953 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CDC42P60953 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
CDC42P60953 AC027601.5-201ENST00000624065 2482 ntBASIC14.17□□□□□ -0.14
CDC42P60953 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.17□□□□□ -0.14
CDC42P60953 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.17□□□□□ -0.14
CDC42P60953 PTENP1-202ENST00000532280 3996 ntBASIC14.17□□□□□ -0.14
CDC42P60953 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.17□□□□□ -0.14
CDC42P60953 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
CDC42P60953 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 FAM220BP-201ENST00000377689 816 ntBASIC14.17□□□□□ -0.14
CDC42P60953 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 AC136604.1-201ENST00000418535 575 ntBASIC14.17□□□□□ -0.14
CDC42P60953 GHSR-202ENST00000427970 912 ntBASIC14.17□□□□□ -0.14
CDC42P60953 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC14.17□□□□□ -0.14
CDC42P60953 RARRES2P8-201ENST00000566335 367 ntBASIC14.17□□□□□ -0.14
CDC42P60953 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.17□□□□□ -0.14
CDC42P60953 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.17□□□□□ -0.14
CDC42P60953 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
CDC42P60953 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.17□□□□□ -0.14
CDC42P60953 MTHFR-210ENST00000641407 2387 ntBASIC14.17□□□□□ -0.14
CDC42P60953 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
CDC42P60953 AL607033.1-201ENST00000623900 1599 ntBASIC14.17□□□□□ -0.14
CDC42P60953 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
CDC42P60953 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 72.9 ms