Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN8P56748 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN8P56748 AP006288.1-201ENST00000446065 395 ntBASIC14.7□□□□□ -0.06
CLDN8P56748 HLA-J-203ENST00000494367 1087 ntBASIC14.7□□□□□ -0.06
CLDN8P56748 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.7□□□□□ -0.06
CLDN8P56748 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
CLDN8P56748 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC14.7□□□□□ -0.06
CLDN8P56748 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN8P56748 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN8P56748 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.7□□□□□ -0.06
CLDN8P56748 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC14.7□□□□□ -0.06
CLDN8P56748 MYO15B-237ENST00000642007 4893 ntBASIC14.7□□□□□ -0.06
CLDN8P56748 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CLDN8P56748 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CLDN8P56748 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CLDN8P56748 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN8P56748 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN8P56748 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLDN8P56748 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.69□□□□□ -0.06
CLDN8P56748 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN8P56748 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLDN8P56748 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 RN7SL618P-201ENST00000477850 296 ntBASIC14.69□□□□□ -0.06
CLDN8P56748 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN8P56748 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN8P56748 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.69□□□□□ -0.06
CLDN8P56748 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CLDN8P56748 AC010336.2-201ENST00000564226 506 ntBASIC14.69□□□□□ -0.06
CLDN8P56748 AC051619.7-201ENST00000568314 623 ntBASIC14.69□□□□□ -0.06
CLDN8P56748 AL138828.2-201ENST00000615812 383 ntBASIC14.69□□□□□ -0.06
CLDN8P56748 SPDYE12P-201ENST00000618416 771 ntBASIC14.69□□□□□ -0.06
CLDN8P56748 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
CLDN8P56748 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLDN8P56748 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CLDN8P56748 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CLDN8P56748 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CLDN8P56748 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.69□□□□□ -0.06
CLDN8P56748 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLDN8P56748 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CLDN8P56748 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CLDN8P56748 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN8P56748 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN8P56748 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN8P56748 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.68□□□□□ -0.06
CLDN8P56748 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN8P56748 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN8P56748 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN8P56748 SDHAP3-202ENST00000515467 728 ntBASIC14.68□□□□□ -0.06
CLDN8P56748 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN8P56748 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.68□□□□□ -0.06
CLDN8P56748 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN8P56748 AC027612.4-201ENST00000605371 583 ntBASIC14.68□□□□□ -0.06
CLDN8P56748 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.68□□□□□ -0.06
CLDN8P56748 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.68□□□□□ -0.06
CLDN8P56748 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLDN8P56748 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms