Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.4□□□□□ -0.1
PER3P56645 ACTBP11-201ENST00000436287 1126 ntBASIC14.4□□□□□ -0.1
PER3P56645 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.4□□□□□ -0.1
PER3P56645 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.4□□□□□ -0.1
PER3P56645 POU5F1P6-201ENST00000466990 990 ntBASIC14.4□□□□□ -0.1
PER3P56645 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.4□□□□□ -0.1
PER3P56645 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.4□□□□□ -0.1
PER3P56645 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.4□□□□□ -0.1
PER3P56645 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.4□□□□□ -0.1
PER3P56645 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.4□□□□□ -0.1
PER3P56645 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.4□□□□□ -0.1
PER3P56645 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.4□□□□□ -0.1
PER3P56645 MIR4259-201ENST00000584466 101 ntBASIC14.4□□□□□ -0.1
PER3P56645 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
PER3P56645 BTNL10-201ENST00000595971 695 ntBASIC14.4□□□□□ -0.1
PER3P56645 AC004790.1-201ENST00000612686 536 ntBASIC14.4□□□□□ -0.1
PER3P56645 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
PER3P56645 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC14.4□□□□□ -0.1
PER3P56645 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.4□□□□□ -0.1
PER3P56645 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.4□□□□□ -0.1
PER3P56645 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
PER3P56645 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
PER3P56645 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
PER3P56645 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
PER3P56645 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.4□□□□□ -0.1
PER3P56645 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
PER3P56645 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PER3P56645 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 CLK3P2-201ENST00000427566 1453 ntBASIC14.39□□□□□ -0.11
PER3P56645 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.39□□□□□ -0.11
PER3P56645 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC14.39□□□□□ -0.11
PER3P56645 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.39□□□□□ -0.11
PER3P56645 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PER3P56645 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PER3P56645 KRT8P44-201ENST00000441609 1350 ntBASIC14.39□□□□□ -0.11
PER3P56645 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PER3P56645 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.39□□□□□ -0.11
PER3P56645 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
PER3P56645 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.39□□□□□ -0.11
PER3P56645 TMEM14DP-201ENST00000422205 345 ntBASIC14.39□□□□□ -0.11
PER3P56645 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.39□□□□□ -0.11
PER3P56645 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
PER3P56645 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.39□□□□□ -0.11
PER3P56645 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.39□□□□□ -0.11
PER3P56645 AC074044.1-201ENST00000609673 707 ntBASIC14.39□□□□□ -0.11
PER3P56645 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.39□□□□□ -0.11
PER3P56645 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PER3P56645 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
PER3P56645 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.39□□□□□ -0.11
PER3P56645 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.39□□□□□ -0.11
PER3P56645 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PER3P56645 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.39□□□□□ -0.11
PER3P56645 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC14.39□□□□□ -0.11
PER3P56645 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.39□□□□□ -0.11
PER3P56645 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.39□□□□□ -0.11
PER3P56645 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PER3P56645 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.38□□□□□ -0.11
PER3P56645 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PER3P56645 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.38□□□□□ -0.11
PER3P56645 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PER3P56645 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms