Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.57■□□□□ 0.24
VCPP55072 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.57■□□□□ 0.24
VCPP55072 AC106872.11-201ENST00000605838 421 ntBASIC16.57■□□□□ 0.24
VCPP55072 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.57■□□□□ 0.24
VCPP55072 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
VCPP55072 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VCPP55072 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VCPP55072 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VCPP55072 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
VCPP55072 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VCPP55072 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.57■□□□□ 0.24
VCPP55072 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
VCPP55072 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VCPP55072 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.56■□□□□ 0.24
VCPP55072 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
VCPP55072 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.56■□□□□ 0.24
VCPP55072 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
VCPP55072 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.56■□□□□ 0.24
VCPP55072 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
VCPP55072 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
VCPP55072 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
VCPP55072 HIST3H2BA-201ENST00000436555 524 ntBASIC16.56■□□□□ 0.24
VCPP55072 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.56■□□□□ 0.24
VCPP55072 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.56■□□□□ 0.24
VCPP55072 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
VCPP55072 AC079328.1-201ENST00000560358 952 ntBASIC16.56■□□□□ 0.24
VCPP55072 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC16.56■□□□□ 0.24
VCPP55072 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.56■□□□□ 0.24
VCPP55072 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
VCPP55072 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.56■□□□□ 0.24
VCPP55072 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC16.56■□□□□ 0.24
VCPP55072 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
VCPP55072 AL136379.1-201ENST00000623471 2642 ntBASIC16.56■□□□□ 0.24
VCPP55072 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.56■□□□□ 0.24
VCPP55072 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
VCPP55072 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
VCPP55072 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 AC006058.4-201ENST00000624016 1670 ntBASIC16.56■□□□□ 0.24
VCPP55072 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
VCPP55072 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 AC006486.2-201ENST00000624246 2199 ntBASIC16.55■□□□□ 0.24
VCPP55072 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
VCPP55072 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VCPP55072 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC16.55■□□□□ 0.24
VCPP55072 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC16.55■□□□□ 0.24
VCPP55072 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 AL691432.1-201ENST00000596308 1422 ntBASIC16.55■□□□□ 0.24
VCPP55072 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 AC090616.6-203ENST00000579186 1945 ntBASIC16.55■□□□□ 0.24
VCPP55072 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
VCPP55072 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
VCPP55072 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.55■□□□□ 0.24
VCPP55072 AC104596.2-201ENST00000512793 793 ntBASIC16.55■□□□□ 0.24
VCPP55072 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.55■□□□□ 0.24
VCPP55072 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC16.55■□□□□ 0.24
VCPP55072 AC243562.2-201ENST00000561247 970 ntBASIC16.55■□□□□ 0.24
VCPP55072 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.55■□□□□ 0.24
VCPP55072 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
VCPP55072 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC16.55■□□□□ 0.24
VCPP55072 MIR6069-201ENST00000620069 79 ntBASIC16.55■□□□□ 0.24
VCPP55072 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.55■□□□□ 0.24
VCPP55072 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
VCPP55072 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
VCPP55072 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.55■□□□□ 0.24
VCPP55072 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
VCPP55072 AL109954.1-202ENST00000564051 2148 ntBASIC16.55■□□□□ 0.24
VCPP55072 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
VCPP55072 AC023824.1-201ENST00000562945 2975 ntBASIC16.55■□□□□ 0.24
VCPP55072 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms