Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NR1H2P55055 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H2P55055 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC14.75□□□□□ -0.05
NR1H2P55055 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.75□□□□□ -0.05
NR1H2P55055 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.75□□□□□ -0.05
NR1H2P55055 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.75□□□□□ -0.05
NR1H2P55055 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 SLC25A6P2-201ENST00000497974 877 ntBASIC14.75□□□□□ -0.05
NR1H2P55055 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.75□□□□□ -0.05
NR1H2P55055 FAM86C2P-203ENST00000528684 1004 ntBASIC14.75□□□□□ -0.05
NR1H2P55055 RFPL4AP1-201ENST00000530883 850 ntBASIC14.75□□□□□ -0.05
NR1H2P55055 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H2P55055 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H2P55055 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.75□□□□□ -0.05
NR1H2P55055 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.75□□□□□ -0.05
NR1H2P55055 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.75□□□□□ -0.05
NR1H2P55055 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
NR1H2P55055 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.75□□□□□ -0.05
NR1H2P55055 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.75□□□□□ -0.05
NR1H2P55055 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H2P55055 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
NR1H2P55055 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.75□□□□□ -0.05
NR1H2P55055 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NR1H2P55055 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.75□□□□□ -0.05
NR1H2P55055 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC14.75□□□□□ -0.05
NR1H2P55055 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H2P55055 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NR1H2P55055 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H2P55055 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
NR1H2P55055 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H2P55055 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H2P55055 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NR1H2P55055 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NR1H2P55055 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 HAUS4P1-201ENST00000406739 1145 ntBASIC14.74□□□□□ -0.05
NR1H2P55055 AL645939.2-201ENST00000427340 991 ntBASIC14.74□□□□□ -0.05
NR1H2P55055 WDR53-203ENST00000429115 683 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H2P55055 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.74□□□□□ -0.05
NR1H2P55055 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H2P55055 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC14.74□□□□□ -0.05
NR1H2P55055 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
NR1H2P55055 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.74□□□□□ -0.05
NR1H2P55055 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.74□□□□□ -0.05
NR1H2P55055 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.74□□□□□ -0.05
NR1H2P55055 AC092902.6-201ENST00000641783 218 ntBASIC14.74□□□□□ -0.05
NR1H2P55055 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
NR1H2P55055 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H2P55055 COL6A4P2-202ENST00000504443 2753 ntBASIC14.74□□□□□ -0.05
NR1H2P55055 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
NR1H2P55055 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.74□□□□□ -0.05
NR1H2P55055 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC14.74□□□□□ -0.05
NR1H2P55055 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
NR1H2P55055 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
NR1H2P55055 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
NR1H2P55055 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
NR1H2P55055 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NR1H2P55055 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.73□□□□□ -0.05
NR1H2P55055 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NR1H2P55055 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NR1H2P55055 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.73□□□□□ -0.05
NR1H2P55055 AC027612.1-201ENST00000445234 2395 ntBASIC14.73□□□□□ -0.05
NR1H2P55055 AL356585.2-201ENST00000625078 2396 ntBASIC14.73□□□□□ -0.05
NR1H2P55055 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NR1H2P55055 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.73□□□□□ -0.05
NR1H2P55055 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.73□□□□□ -0.05
NR1H2P55055 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.73□□□□□ -0.05
NR1H2P55055 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
NR1H2P55055 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms