Protein–RNA interactions for Protein: P52738

ZNF140, Zinc finger protein 140, humanhuman

Predicted RBP Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF140P52738 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.32■□□□□ 0.04
ZNF140P52738 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.32■□□□□ 0.04
ZNF140P52738 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.32■□□□□ 0.04
ZNF140P52738 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF140P52738 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.32■□□□□ 0.04
ZNF140P52738 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF140P52738 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC15.32■□□□□ 0.04
ZNF140P52738 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.32■□□□□ 0.04
ZNF140P52738 CTBP2P3-201ENST00000585629 1255 ntBASIC15.32■□□□□ 0.04
ZNF140P52738 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
ZNF140P52738 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC15.32■□□□□ 0.04
ZNF140P52738 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.32■□□□□ 0.04
ZNF140P52738 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC15.32■□□□□ 0.04
ZNF140P52738 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ZNF140P52738 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.32■□□□□ 0.04
ZNF140P52738 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 TSPY26P-202ENST00000565928 3884 ntBASIC15.32■□□□□ 0.04
ZNF140P52738 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF140P52738 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.32■□□□□ 0.04
ZNF140P52738 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ZNF140P52738 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
ZNF140P52738 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ZNF140P52738 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ZNF140P52738 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF140P52738 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF140P52738 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
ZNF140P52738 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF140P52738 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF140P52738 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF140P52738 AL645937.2-201ENST00000396808 931 ntBASIC15.31■□□□□ 0.04
ZNF140P52738 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.31■□□□□ 0.04
ZNF140P52738 SOCS2P1-201ENST00000417727 557 ntBASIC15.31■□□□□ 0.04
ZNF140P52738 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF140P52738 CRB3P1-201ENST00000449338 276 ntBASIC15.31■□□□□ 0.04
ZNF140P52738 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.31■□□□□ 0.04
ZNF140P52738 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.31■□□□□ 0.04
ZNF140P52738 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC15.31■□□□□ 0.04
ZNF140P52738 SPDYE22P-201ENST00000582158 798 ntBASIC15.31■□□□□ 0.04
ZNF140P52738 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.31■□□□□ 0.04
ZNF140P52738 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF140P52738 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
ZNF140P52738 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF140P52738 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF140P52738 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF140P52738 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ZNF140P52738 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF140P52738 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
ZNF140P52738 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC15.31■□□□□ 0.04
ZNF140P52738 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC15.31■□□□□ 0.04
ZNF140P52738 AL157414.3-201ENST00000624276 1954 ntBASIC15.31■□□□□ 0.04
ZNF140P52738 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ZNF140P52738 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.3■□□□□ 0.04
ZNF140P52738 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.3■□□□□ 0.04
ZNF140P52738 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.3■□□□□ 0.04
ZNF140P52738 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
ZNF140P52738 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms