Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC15.21■□□□□ 0.03
GTF2A1P52655 ZMPSTE24-201ENST00000372759 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GTF2A1P52655 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.21■□□□□ 0.03
GTF2A1P52655 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.21■□□□□ 0.03
GTF2A1P52655 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
GTF2A1P52655 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.21■□□□□ 0.03
GTF2A1P52655 STARP1-201ENST00000397973 869 ntBASIC15.21■□□□□ 0.03
GTF2A1P52655 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 FAM8A3P-201ENST00000427218 844 ntBASIC15.21■□□□□ 0.03
GTF2A1P52655 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 POU5F1P6-201ENST00000466990 990 ntBASIC15.21■□□□□ 0.03
GTF2A1P52655 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.21■□□□□ 0.03
GTF2A1P52655 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.21■□□□□ 0.03
GTF2A1P52655 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC15.21■□□□□ 0.03
GTF2A1P52655 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC15.21■□□□□ 0.03
GTF2A1P52655 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 AP006294.2-201ENST00000641667 209 ntBASIC15.21■□□□□ 0.03
GTF2A1P52655 AL357140.3-201ENST00000639753 1983 ntBASIC15.21■□□□□ 0.03
GTF2A1P52655 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC15.21■□□□□ 0.03
GTF2A1P52655 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 HSPA2-201ENST00000247207 2767 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
GTF2A1P52655 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GTF2A1P52655 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
GTF2A1P52655 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GTF2A1P52655 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
GTF2A1P52655 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.21■□□□□ 0.02
GTF2A1P52655 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
GTF2A1P52655 TBC1D13-202ENST00000372648 3906 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GTF2A1P52655 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC15.21■□□□□ 0.02
GTF2A1P52655 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
GTF2A1P52655 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 PIM1-201ENST00000373509 2650 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 AL049757.1-201ENST00000616842 1596 ntBASIC15.2■□□□□ 0.02
GTF2A1P52655 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC15.2■□□□□ 0.02
GTF2A1P52655 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.2■□□□□ 0.02
GTF2A1P52655 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
GTF2A1P52655 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC15.2■□□□□ 0.02
GTF2A1P52655 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.2■□□□□ 0.02
GTF2A1P52655 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 COX11P1-201ENST00000489116 835 ntBASIC15.2■□□□□ 0.02
GTF2A1P52655 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.2■□□□□ 0.02
GTF2A1P52655 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.2■□□□□ 0.02
GTF2A1P52655 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC15.2■□□□□ 0.02
GTF2A1P52655 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
GTF2A1P52655 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.2■□□□□ 0.02
GTF2A1P52655 AC011558.1-201ENST00000623459 338 ntBASIC15.2■□□□□ 0.02
GTF2A1P52655 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 SUPT20HL1-201ENST00000436466 2618 ntBASIC15.2■□□□□ 0.02
GTF2A1P52655 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.2■□□□□ 0.02
GTF2A1P52655 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC15.2■□□□□ 0.02
GTF2A1P52655 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC15.2■□□□□ 0.02
GTF2A1P52655 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC15.2■□□□□ 0.02
GTF2A1P52655 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
GTF2A1P52655 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.2■□□□□ 0.02
GTF2A1P52655 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
GTF2A1P52655 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
GTF2A1P52655 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.19■□□□□ 0.02
GTF2A1P52655 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.19■□□□□ 0.02
GTF2A1P52655 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC15.19■□□□□ 0.02
GTF2A1P52655 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
GTF2A1P52655 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms