Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.63□□□□□ -0.07
CLK1P49759 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.63□□□□□ -0.07
CLK1P49759 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC14.63□□□□□ -0.07
CLK1P49759 RNA5SP410-201ENST00000516285 106 ntBASIC14.63□□□□□ -0.07
CLK1P49759 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.63□□□□□ -0.07
CLK1P49759 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.63□□□□□ -0.07
CLK1P49759 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.63□□□□□ -0.07
CLK1P49759 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
CLK1P49759 AC009093.7-201ENST00000623853 1223 ntBASIC14.63□□□□□ -0.07
CLK1P49759 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.63□□□□□ -0.07
CLK1P49759 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.63□□□□□ -0.07
CLK1P49759 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLK1P49759 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.63□□□□□ -0.07
CLK1P49759 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLK1P49759 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.63□□□□□ -0.07
CLK1P49759 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLK1P49759 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLK1P49759 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CLK1P49759 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.63□□□□□ -0.07
CLK1P49759 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLK1P49759 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLK1P49759 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLK1P49759 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.63□□□□□ -0.07
CLK1P49759 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.63□□□□□ -0.07
CLK1P49759 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLK1P49759 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLK1P49759 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CLK1P49759 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CLK1P49759 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC14.62□□□□□ -0.07
CLK1P49759 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.62□□□□□ -0.07
CLK1P49759 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CLK1P49759 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.62□□□□□ -0.07
CLK1P49759 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.62□□□□□ -0.07
CLK1P49759 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.62□□□□□ -0.07
CLK1P49759 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CLK1P49759 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.62□□□□□ -0.07
CLK1P49759 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
CLK1P49759 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 HAUS4P1-201ENST00000406739 1145 ntBASIC14.62□□□□□ -0.07
CLK1P49759 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.62□□□□□ -0.07
CLK1P49759 AC023141.5-201ENST00000458585 616 ntBASIC14.62□□□□□ -0.07
CLK1P49759 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CLK1P49759 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.62□□□□□ -0.07
CLK1P49759 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC14.62□□□□□ -0.07
CLK1P49759 ALG1L8P-201ENST00000533887 760 ntBASIC14.62□□□□□ -0.07
CLK1P49759 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.62□□□□□ -0.07
CLK1P49759 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.62□□□□□ -0.07
CLK1P49759 AC026979.3-201ENST00000607315 403 ntBASIC14.62□□□□□ -0.07
CLK1P49759 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.62□□□□□ -0.07
CLK1P49759 AP3S2-216ENST00000617003 1561 ntBASIC14.62□□□□□ -0.07
CLK1P49759 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.62□□□□□ -0.07
CLK1P49759 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.62□□□□□ -0.07
CLK1P49759 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CLK1P49759 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CLK1P49759 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CLK1P49759 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
CLK1P49759 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CLK1P49759 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.61□□□□□ -0.07
CLK1P49759 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.61□□□□□ -0.07
CLK1P49759 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.61□□□□□ -0.07
CLK1P49759 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.61□□□□□ -0.07
CLK1P49759 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC14.61□□□□□ -0.07
CLK1P49759 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CLK1P49759 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.61□□□□□ -0.07
CLK1P49759 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
CLK1P49759 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CLK1P49759 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CLK1P49759 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms