Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC10.49□□□□□ -0.73
CXCL5P42830 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
CXCL5P42830 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 GOLGA2P9-201ENST00000596977 1937 ntBASIC10.49□□□□□ -0.73
CXCL5P42830 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CXCL5P42830 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 EEF1DP4-201ENST00000446006 880 ntBASIC10.49□□□□□ -0.73
CXCL5P42830 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
CXCL5P42830 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC10.49□□□□□ -0.73
CXCL5P42830 AC079776.4-201ENST00000511039 504 ntBASIC10.49□□□□□ -0.73
CXCL5P42830 SMN2-210ENST00000511812 867 ntTSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 RNA5SP410-201ENST00000516285 106 ntBASIC10.49□□□□□ -0.73
CXCL5P42830 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC10.49□□□□□ -0.73
CXCL5P42830 RARRES2P8-201ENST00000566335 367 ntBASIC10.49□□□□□ -0.73
CXCL5P42830 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC10.49□□□□□ -0.73
CXCL5P42830 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC10.49□□□□□ -0.73
CXCL5P42830 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC10.49□□□□□ -0.73
CXCL5P42830 AQP6-205ENST00000618286 829 ntTSL 5 BASIC10.49□□□□□ -0.73
CXCL5P42830 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 APP-205ENST00000358918 2366 ntTSL 5 BASIC10.49□□□□□ -0.73
CXCL5P42830 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 REM2-202ENST00000536884 1331 ntTSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 BCAR1-209ENST00000546196 1340 ntBASIC10.49□□□□□ -0.73
CXCL5P42830 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
CXCL5P42830 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC10.49□□□□□ -0.73
CXCL5P42830 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
CXCL5P42830 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC10.49□□□□□ -0.73
CXCL5P42830 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
CXCL5P42830 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
CXCL5P42830 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC10.49□□□□□ -0.73
CXCL5P42830 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
CXCL5P42830 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC10.48□□□□□ -0.73
CXCL5P42830 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC10.48□□□□□ -0.73
CXCL5P42830 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC10.48□□□□□ -0.73
CXCL5P42830 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
CXCL5P42830 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
CXCL5P42830 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC10.48□□□□□ -0.73
CXCL5P42830 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
CXCL5P42830 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC10.48□□□□□ -0.73
CXCL5P42830 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
CXCL5P42830 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC10.48□□□□□ -0.73
CXCL5P42830 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC10.48□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms