Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 REXO1L4P-201ENST00000605109 1937 ntBASIC15.78■□□□□ 0.12
SLC6A4P31645 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
SLC6A4P31645 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
SLC6A4P31645 ZBTB45P1-201ENST00000452761 1456 ntBASIC15.78■□□□□ 0.12
SLC6A4P31645 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SLC6A4P31645 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A4P31645 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A4P31645 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.77■□□□□ 0.12
SLC6A4P31645 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A4P31645 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A4P31645 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A4P31645 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
SLC6A4P31645 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A4P31645 AL157414.3-201ENST00000624276 1954 ntBASIC15.77■□□□□ 0.12
SLC6A4P31645 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A4P31645 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A4P31645 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
SLC6A4P31645 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A4P31645 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.77■□□□□ 0.12
SLC6A4P31645 HLA-K-203ENST00000430151 1046 ntBASIC15.77■□□□□ 0.12
SLC6A4P31645 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
SLC6A4P31645 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC6A4P31645 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC6A4P31645 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC15.77■□□□□ 0.12
SLC6A4P31645 COX11-210ENST00000639671 696 ntBASIC15.77■□□□□ 0.12
SLC6A4P31645 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC6A4P31645 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC6A4P31645 REXO1L5P-201ENST00000622260 2098 ntBASIC15.77■□□□□ 0.11
SLC6A4P31645 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC6A4P31645 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A4P31645 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
SLC6A4P31645 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A4P31645 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A4P31645 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A4P31645 KRT8P14-201ENST00000414254 1442 ntBASIC15.77■□□□□ 0.11
SLC6A4P31645 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
SLC6A4P31645 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.77■□□□□ 0.11
SLC6A4P31645 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
SLC6A4P31645 AC023024.2-201ENST00000623561 1993 ntBASIC15.76■□□□□ 0.11
SLC6A4P31645 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A4P31645 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SLC6A4P31645 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SLC6A4P31645 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A4P31645 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SLC6A4P31645 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SLC6A4P31645 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
SLC6A4P31645 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A4P31645 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A4P31645 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A4P31645 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
SLC6A4P31645 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 RPL7P3-201ENST00000441388 714 ntBASIC15.76■□□□□ 0.11
SLC6A4P31645 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A4P31645 KLF2P4-201ENST00000451959 1225 ntBASIC15.76■□□□□ 0.11
SLC6A4P31645 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.76■□□□□ 0.11
SLC6A4P31645 KRT90P-201ENST00000549264 1064 ntBASIC15.76■□□□□ 0.11
SLC6A4P31645 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC15.76■□□□□ 0.11
SLC6A4P31645 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A4P31645 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A4P31645 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SLC6A4P31645 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC15.76■□□□□ 0.11
SLC6A4P31645 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A4P31645 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
SLC6A4P31645 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A4P31645 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
SLC6A4P31645 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.76■□□□□ 0.11
SLC6A4P31645 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC15.76■□□□□ 0.11
SLC6A4P31645 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
SLC6A4P31645 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SLC6A4P31645 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms