Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC17.56■□□□□ 0.4
CNGA1P29973 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CNGA1P29973 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.56■□□□□ 0.4
CNGA1P29973 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC17.56■□□□□ 0.4
CNGA1P29973 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC17.56■□□□□ 0.4
CNGA1P29973 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC17.56■□□□□ 0.4
CNGA1P29973 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC17.56■□□□□ 0.4
CNGA1P29973 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 AC138028.6-201ENST00000616106 1482 ntBASIC17.56■□□□□ 0.4
CNGA1P29973 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC17.56■□□□□ 0.4
CNGA1P29973 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.56■□□□□ 0.4
CNGA1P29973 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CNGA1P29973 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CNGA1P29973 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 FOS-202ENST00000535987 1402 ntTSL 2 BASIC17.55■□□□□ 0.4
CNGA1P29973 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC17.55■□□□□ 0.4
CNGA1P29973 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.55■□□□□ 0.4
CNGA1P29973 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.55■□□□□ 0.4
CNGA1P29973 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC17.55■□□□□ 0.4
CNGA1P29973 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CNGA1P29973 AC004898.1-201ENST00000451057 766 ntBASIC17.55■□□□□ 0.4
CNGA1P29973 RPSAP36-202ENST00000494591 1261 ntBASIC17.55■□□□□ 0.4
CNGA1P29973 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.55■□□□□ 0.4
CNGA1P29973 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.55■□□□□ 0.4
CNGA1P29973 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.55■□□□□ 0.4
CNGA1P29973 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
CNGA1P29973 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.55■□□□□ 0.4
CNGA1P29973 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CNGA1P29973 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.55■□□□□ 0.4
CNGA1P29973 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CNGA1P29973 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CNGA1P29973 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CNGA1P29973 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CNGA1P29973 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.55■□□□□ 0.4
CNGA1P29973 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CNGA1P29973 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CNGA1P29973 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.55■□□□□ 0.4
CNGA1P29973 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.55■□□□□ 0.4
CNGA1P29973 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.55■□□□□ 0.4
CNGA1P29973 AL138709.1-201ENST00000614840 1693 ntBASIC17.55■□□□□ 0.4
CNGA1P29973 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CNGA1P29973 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNGA1P29973 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.54■□□□□ 0.4
CNGA1P29973 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNGA1P29973 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CNGA1P29973 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNGA1P29973 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.54■□□□□ 0.4
CNGA1P29973 AC015818.8-201ENST00000587907 1519 ntBASIC17.54■□□□□ 0.4
CNGA1P29973 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNGA1P29973 AL133267.1-201ENST00000398220 340 ntBASIC17.54■□□□□ 0.4
CNGA1P29973 SUN1-204ENST00000403868 978 ntTSL 2 BASIC17.54■□□□□ 0.4
CNGA1P29973 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.54■□□□□ 0.4
CNGA1P29973 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.54■□□□□ 0.4
CNGA1P29973 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.54■□□□□ 0.4
CNGA1P29973 EEF1DP1-201ENST00000585891 896 ntBASIC17.54■□□□□ 0.4
CNGA1P29973 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.54■□□□□ 0.4
CNGA1P29973 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.54■□□□□ 0.4
CNGA1P29973 BX539320.1-201ENST00000623759 877 ntBASIC17.54■□□□□ 0.4
CNGA1P29973 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC17.54■□□□□ 0.4
CNGA1P29973 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC17.54■□□□□ 0.4
CNGA1P29973 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNGA1P29973 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CNGA1P29973 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNGA1P29973 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNGA1P29973 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNGA1P29973 AL138799.1-201ENST00000448213 1675 ntBASIC17.54■□□□□ 0.4
CNGA1P29973 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC17.54■□□□□ 0.4
CNGA1P29973 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNGA1P29973 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNGA1P29973 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CNGA1P29973 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNGA1P29973 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CNGA1P29973 AL365203.3-201ENST00000609742 2057 ntBASIC17.54■□□□□ 0.4
CNGA1P29973 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CNGA1P29973 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CNGA1P29973 ACE-203ENST00000413513 2237 ntTSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms