Protein–RNA interactions for Protein: P20337

RAB3B, Ras-related protein Rab-3B, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3BP20337 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB3BP20337 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB3BP20337 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.6□□□□□ -0.23
RAB3BP20337 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC13.6□□□□□ -0.23
RAB3BP20337 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB3BP20337 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB3BP20337 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
RAB3BP20337 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
RAB3BP20337 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
RAB3BP20337 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.6□□□□□ -0.23
RAB3BP20337 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
RAB3BP20337 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
RAB3BP20337 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
RAB3BP20337 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB3BP20337 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
RAB3BP20337 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB3BP20337 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB3BP20337 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB3BP20337 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB3BP20337 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC13.59□□□□□ -0.23
RAB3BP20337 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
RAB3BP20337 HCG4P8-203ENST00000443049 980 ntBASIC13.59□□□□□ -0.23
RAB3BP20337 ELP6-209ENST00000446787 894 ntTSL 3 BASIC13.59□□□□□ -0.23
RAB3BP20337 FAM197Y8-203ENST00000450145 560 ntBASIC13.59□□□□□ -0.23
RAB3BP20337 AL139010.1-201ENST00000454878 894 ntBASIC13.59□□□□□ -0.23
RAB3BP20337 AF186996.4-201ENST00000467186 377 ntBASIC13.59□□□□□ -0.23
RAB3BP20337 AC105233.2-201ENST00000523697 349 ntBASIC13.59□□□□□ -0.23
RAB3BP20337 AF228730.5-201ENST00000530288 346 ntBASIC13.59□□□□□ -0.23
RAB3BP20337 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC13.59□□□□□ -0.23
RAB3BP20337 MED16-214ENST00000617672 554 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB3BP20337 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
RAB3BP20337 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.59□□□□□ -0.23
RAB3BP20337 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RAB3BP20337 AC018529.2-202ENST00000611482 3087 ntBASIC13.59□□□□□ -0.23
RAB3BP20337 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.59□□□□□ -0.23
RAB3BP20337 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB3BP20337 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.59□□□□□ -0.23
RAB3BP20337 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
RAB3BP20337 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
RAB3BP20337 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RAB3BP20337 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
RAB3BP20337 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
RAB3BP20337 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
RAB3BP20337 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.58□□□□□ -0.23
RAB3BP20337 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
RAB3BP20337 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.58□□□□□ -0.23
RAB3BP20337 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RAB3BP20337 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.58□□□□□ -0.24
RAB3BP20337 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB3BP20337 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
RAB3BP20337 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
RAB3BP20337 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
RAB3BP20337 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB3BP20337 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
RAB3BP20337 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.58□□□□□ -0.24
RAB3BP20337 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.58□□□□□ -0.24
RAB3BP20337 AC092910.1-201ENST00000482027 1129 ntBASIC13.58□□□□□ -0.24
RAB3BP20337 SKP2-204ENST00000508514 821 ntTSL 3 BASIC13.58□□□□□ -0.24
RAB3BP20337 RNA5SP410-201ENST00000516285 106 ntBASIC13.58□□□□□ -0.24
RAB3BP20337 UNC93B6-202ENST00000528242 690 ntBASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms