Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD58P19256 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 VDAC1P7-201ENST00000462417 847 ntBASIC16.59■□□□□ 0.25
CD58P19256 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.59■□□□□ 0.25
CD58P19256 AC140912.1-201ENST00000577171 1054 ntBASIC16.59■□□□□ 0.25
CD58P19256 MIR3197-201ENST00000582241 73 ntBASIC16.59■□□□□ 0.25
CD58P19256 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.59■□□□□ 0.25
CD58P19256 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.59■□□□□ 0.25
CD58P19256 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.59■□□□□ 0.25
CD58P19256 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.59■□□□□ 0.25
CD58P19256 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.59■□□□□ 0.25
CD58P19256 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.59■□□□□ 0.25
CD58P19256 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.59■□□□□ 0.25
CD58P19256 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC16.59■□□□□ 0.25
CD58P19256 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
CD58P19256 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.59■□□□□ 0.25
CD58P19256 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CD58P19256 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC16.59■□□□□ 0.25
CD58P19256 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CD58P19256 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CD58P19256 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CD58P19256 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
CD58P19256 AC068418.2-201ENST00000577309 3703 ntBASIC16.58■□□□□ 0.25
CD58P19256 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CD58P19256 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.58■□□□□ 0.24
CD58P19256 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD58P19256 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD58P19256 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.58■□□□□ 0.24
CD58P19256 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD58P19256 RPL5P21-201ENST00000404620 815 ntBASIC16.58■□□□□ 0.24
CD58P19256 CRB3P1-201ENST00000449338 276 ntBASIC16.58■□□□□ 0.24
CD58P19256 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD58P19256 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.58■□□□□ 0.24
CD58P19256 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.58■□□□□ 0.24
CD58P19256 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.58■□□□□ 0.24
CD58P19256 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.58■□□□□ 0.24
CD58P19256 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC16.58■□□□□ 0.24
CD58P19256 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.58■□□□□ 0.24
CD58P19256 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
CD58P19256 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.58■□□□□ 0.24
CD58P19256 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
CD58P19256 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD58P19256 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CD58P19256 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD58P19256 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC16.58■□□□□ 0.24
CD58P19256 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.58■□□□□ 0.24
CD58P19256 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD58P19256 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.58■□□□□ 0.24
CD58P19256 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CD58P19256 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CD58P19256 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD58P19256 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD58P19256 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.58■□□□□ 0.24
CD58P19256 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD58P19256 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.58■□□□□ 0.24
CD58P19256 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CD58P19256 AL161772.1-201ENST00000610494 4412 ntBASIC16.58■□□□□ 0.24
CD58P19256 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD58P19256 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CD58P19256 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CD58P19256 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC16.57■□□□□ 0.24
CD58P19256 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.57■□□□□ 0.24
CD58P19256 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CD58P19256 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CD58P19256 KRT8P44-201ENST00000441609 1350 ntBASIC16.57■□□□□ 0.24
CD58P19256 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.57■□□□□ 0.24
CD58P19256 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CD58P19256 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.57■□□□□ 0.24
CD58P19256 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms