Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NELFEP18615 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
NELFEP18615 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
NELFEP18615 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
NELFEP18615 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NELFEP18615 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NELFEP18615 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
NELFEP18615 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.35■□□□□ 0.05
NELFEP18615 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.35■□□□□ 0.05
NELFEP18615 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.35■□□□□ 0.05
NELFEP18615 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.35■□□□□ 0.05
NELFEP18615 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.35■□□□□ 0.05
NELFEP18615 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.35■□□□□ 0.05
NELFEP18615 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.35■□□□□ 0.05
NELFEP18615 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC15.35■□□□□ 0.05
NELFEP18615 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.35■□□□□ 0.05
NELFEP18615 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 NME2P1-201ENST00000426182 414 ntBASIC15.35■□□□□ 0.05
NELFEP18615 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.35■□□□□ 0.05
NELFEP18615 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC15.35■□□□□ 0.05
NELFEP18615 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 SUOX-214ENST00000551841 906 ntTSL 3 BASIC15.35■□□□□ 0.05
NELFEP18615 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
NELFEP18615 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.35■□□□□ 0.05
NELFEP18615 AC004790.1-201ENST00000612686 536 ntBASIC15.35■□□□□ 0.05
NELFEP18615 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NELFEP18615 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.35■□□□□ 0.05
NELFEP18615 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.35■□□□□ 0.05
NELFEP18615 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
NELFEP18615 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.35■□□□□ 0.05
NELFEP18615 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
NELFEP18615 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
NELFEP18615 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NELFEP18615 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
NELFEP18615 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NELFEP18615 AC069224.1-201ENST00000566372 1715 ntBASIC15.34■□□□□ 0.05
NELFEP18615 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.34■□□□□ 0.05
NELFEP18615 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NELFEP18615 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
NELFEP18615 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NELFEP18615 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 AC005089.1-201ENST00000619486 2241 ntBASIC15.34■□□□□ 0.05
NELFEP18615 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.34■□□□□ 0.05
NELFEP18615 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.34■□□□□ 0.05
NELFEP18615 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.34■□□□□ 0.05
NELFEP18615 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.34■□□□□ 0.05
NELFEP18615 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC15.34■□□□□ 0.05
NELFEP18615 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.34■□□□□ 0.05
NELFEP18615 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.34■□□□□ 0.05
NELFEP18615 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.34■□□□□ 0.05
NELFEP18615 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.34■□□□□ 0.05
NELFEP18615 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.34■□□□□ 0.05
NELFEP18615 AC025048.3-201ENST00000590609 569 ntBASIC15.34■□□□□ 0.05
NELFEP18615 AC074044.1-201ENST00000609673 707 ntBASIC15.34■□□□□ 0.05
NELFEP18615 AC005702.4-201ENST00000618393 416 ntBASIC15.34■□□□□ 0.05
NELFEP18615 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
NELFEP18615 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NELFEP18615 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms