Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC26.27■■□□□ 1.8
TOP2AP11388 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC26.27■■□□□ 1.8
TOP2AP11388 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC26.27■■□□□ 1.8
TOP2AP11388 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TOP2AP11388 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC26.26■■□□□ 1.8
TOP2AP11388 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC26.26■■□□□ 1.8
TOP2AP11388 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC26.26■■□□□ 1.8
TOP2AP11388 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC26.26■■□□□ 1.8
TOP2AP11388 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC26.26■■□□□ 1.8
TOP2AP11388 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TOP2AP11388 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TOP2AP11388 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TOP2AP11388 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
TOP2AP11388 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC26.26■■□□□ 1.79
TOP2AP11388 SOD2-202ENST00000367054 815 ntTSL 2 BASIC26.26■■□□□ 1.79
TOP2AP11388 DNAJB1P1-201ENST00000429417 1024 ntBASIC26.26■■□□□ 1.79
TOP2AP11388 PTPA-215ENST00000432124 567 ntTSL 4 BASIC26.26■■□□□ 1.79
TOP2AP11388 IGHV3-37-201ENST00000518544 340 ntBASIC26.26■■□□□ 1.79
TOP2AP11388 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
TOP2AP11388 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC26.26■■□□□ 1.79
TOP2AP11388 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC26.26■■□□□ 1.79
TOP2AP11388 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
TOP2AP11388 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
TOP2AP11388 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
TOP2AP11388 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC26.26■■□□□ 1.79
TOP2AP11388 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC26.25■■□□□ 1.79
TOP2AP11388 XBP1P1-201ENST00000436573 652 ntBASIC26.25■■□□□ 1.79
TOP2AP11388 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC26.25■■□□□ 1.79
TOP2AP11388 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC26.25■■□□□ 1.79
TOP2AP11388 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC26.25■■□□□ 1.79
TOP2AP11388 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC26.25■■□□□ 1.79
TOP2AP11388 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC26.25■■□□□ 1.79
TOP2AP11388 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
TOP2AP11388 FAM90A2P-201ENST00000511144 1395 ntBASIC26.25■■□□□ 1.79
TOP2AP11388 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
TOP2AP11388 FAM90A25P-201ENST00000528404 1395 ntBASIC26.25■■□□□ 1.79
TOP2AP11388 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
TOP2AP11388 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
TOP2AP11388 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
TOP2AP11388 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TOP2AP11388 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC26.24■■□□□ 1.79
TOP2AP11388 RNA5SP359-201ENST00000364838 113 ntBASIC26.24■■□□□ 1.79
TOP2AP11388 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TOP2AP11388 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TOP2AP11388 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TOP2AP11388 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC26.24■■□□□ 1.79
TOP2AP11388 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC26.24■■□□□ 1.79
TOP2AP11388 MIR6842-201ENST00000612539 65 ntBASIC26.24■■□□□ 1.79
TOP2AP11388 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TOP2AP11388 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TOP2AP11388 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
TOP2AP11388 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC26.24■■□□□ 1.79
TOP2AP11388 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
TOP2AP11388 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TOP2AP11388 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TOP2AP11388 RPL8P2-201ENST00000430538 502 ntBASIC26.24■■□□□ 1.79
TOP2AP11388 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC26.24■■□□□ 1.79
TOP2AP11388 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC26.24■■□□□ 1.79
TOP2AP11388 NAGK-204ENST00000443872 878 ntTSL 3 BASIC26.24■■□□□ 1.79
TOP2AP11388 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC26.24■■□□□ 1.79
TOP2AP11388 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TOP2AP11388 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC26.24■■□□□ 1.79
TOP2AP11388 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC26.24■■□□□ 1.79
TOP2AP11388 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC26.23■■□□□ 1.79
TOP2AP11388 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC26.23■■□□□ 1.79
TOP2AP11388 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
TOP2AP11388 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC26.23■■□□□ 1.79
TOP2AP11388 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC26.23■■□□□ 1.79
TOP2AP11388 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC26.23■■□□□ 1.79
TOP2AP11388 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC26.23■■□□□ 1.79
TOP2AP11388 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC26.23■■□□□ 1.79
TOP2AP11388 KRT8P31-201ENST00000504812 1408 ntBASIC26.23■■□□□ 1.79
TOP2AP11388 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC26.23■■□□□ 1.79
TOP2AP11388 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC26.23■■□□□ 1.79
TOP2AP11388 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
TOP2AP11388 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TOP2AP11388 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC26.22■■□□□ 1.79
TOP2AP11388 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TOP2AP11388 AL513523.2-202ENST00000427283 2040 ntBASIC26.22■■□□□ 1.79
TOP2AP11388 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TOP2AP11388 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TOP2AP11388 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC26.22■■□□□ 1.79
TOP2AP11388 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
TOP2AP11388 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC26.22■■□□□ 1.79
TOP2AP11388 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC26.22■■□□□ 1.79
TOP2AP11388 RPL18AP3-201ENST00000462885 528 ntBASIC26.22■■□□□ 1.79
TOP2AP11388 POU5F1P2-201ENST00000521750 823 ntBASIC26.22■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms