Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC13.62□□□□□ -0.23
UBCP0CG48 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
UBCP0CG48 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 AJ011931.1-201ENST00000618749 2492 ntBASIC13.62□□□□□ -0.23
UBCP0CG48 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.62□□□□□ -0.23
UBCP0CG48 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
UBCP0CG48 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
UBCP0CG48 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 AL035456.1-201ENST00000456064 1369 ntBASIC13.61□□□□□ -0.23
UBCP0CG48 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
UBCP0CG48 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 ELL2P1-201ENST00000413990 1906 ntBASIC13.61□□□□□ -0.23
UBCP0CG48 ARHGAP23P1-201ENST00000562773 1937 ntBASIC13.61□□□□□ -0.23
UBCP0CG48 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
UBCP0CG48 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
UBCP0CG48 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UBCP0CG48 MIR940-201ENST00000401276 94 ntBASIC13.61□□□□□ -0.23
UBCP0CG48 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.61□□□□□ -0.23
UBCP0CG48 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.61□□□□□ -0.23
UBCP0CG48 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
UBCP0CG48 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.61□□□□□ -0.23
UBCP0CG48 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC13.61□□□□□ -0.23
UBCP0CG48 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC13.61□□□□□ -0.23
UBCP0CG48 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.61□□□□□ -0.23
UBCP0CG48 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
UBCP0CG48 AC022145.2-201ENST00000598203 171 ntBASIC13.61□□□□□ -0.23
UBCP0CG48 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UBCP0CG48 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
UBCP0CG48 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
UBCP0CG48 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.61□□□□□ -0.23
UBCP0CG48 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 ST20-AS1-201ENST00000560255 4223 ntBASIC13.61□□□□□ -0.23
UBCP0CG48 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
UBCP0CG48 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
UBCP0CG48 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
UBCP0CG48 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
UBCP0CG48 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
UBCP0CG48 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.6□□□□□ -0.23
UBCP0CG48 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.6□□□□□ -0.23
UBCP0CG48 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
UBCP0CG48 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UBCP0CG48 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
UBCP0CG48 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
UBCP0CG48 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.6□□□□□ -0.23
UBCP0CG48 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.6□□□□□ -0.23
UBCP0CG48 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
UBCP0CG48 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 AC005912.2-201ENST00000619492 2400 ntBASIC13.6□□□□□ -0.23
UBCP0CG48 LINC00552-201ENST00000625151 2579 ntBASIC13.6□□□□□ -0.23
UBCP0CG48 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.6□□□□□ -0.23
UBCP0CG48 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
UBCP0CG48 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
UBCP0CG48 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.6□□□□□ -0.23
UBCP0CG48 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
UBCP0CG48 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
UBCP0CG48 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
UBCP0CG48 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC13.6□□□□□ -0.23
UBCP0CG48 GHSR-202ENST00000427970 912 ntBASIC13.6□□□□□ -0.23
UBCP0CG48 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.6□□□□□ -0.23
UBCP0CG48 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.6□□□□□ -0.23
UBCP0CG48 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.6□□□□□ -0.23
UBCP0CG48 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.6□□□□□ -0.23
UBCP0CG48 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.6□□□□□ -0.23
UBCP0CG48 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
UBCP0CG48 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms