Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.47■□□□□ 0.23
FAM228BP0C875 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM228BP0C875 AC074044.1-201ENST00000609673 707 ntBASIC16.47■□□□□ 0.23
FAM228BP0C875 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC16.47■□□□□ 0.23
FAM228BP0C875 AC134684.3-201ENST00000641758 218 ntBASIC16.47■□□□□ 0.23
FAM228BP0C875 AL109936.8-201ENST00000641772 604 ntBASIC16.47■□□□□ 0.23
FAM228BP0C875 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM228BP0C875 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM228BP0C875 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM228BP0C875 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM228BP0C875 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC16.47■□□□□ 0.23
FAM228BP0C875 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
FAM228BP0C875 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
FAM228BP0C875 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM228BP0C875 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM228BP0C875 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM228BP0C875 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.47■□□□□ 0.23
FAM228BP0C875 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM228BP0C875 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM228BP0C875 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
FAM228BP0C875 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.47■□□□□ 0.23
FAM228BP0C875 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM228BP0C875 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
FAM228BP0C875 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
FAM228BP0C875 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.46■□□□□ 0.23
FAM228BP0C875 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 SF1-209ENST00000433274 2317 ntTSL 2 BASIC16.46■□□□□ 0.23
FAM228BP0C875 INTS4P1-203ENST00000641008 3683 ntBASIC16.46■□□□□ 0.23
FAM228BP0C875 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.46■□□□□ 0.23
FAM228BP0C875 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
FAM228BP0C875 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.46■□□□□ 0.23
FAM228BP0C875 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
FAM228BP0C875 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.46■□□□□ 0.23
FAM228BP0C875 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
FAM228BP0C875 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
FAM228BP0C875 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 AL139400.1-201ENST00000366220 510 ntBASIC16.46■□□□□ 0.23
FAM228BP0C875 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.46■□□□□ 0.23
FAM228BP0C875 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC16.46■□□□□ 0.23
FAM228BP0C875 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.46■□□□□ 0.23
FAM228BP0C875 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.46■□□□□ 0.23
FAM228BP0C875 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.46■□□□□ 0.23
FAM228BP0C875 AC097359.2-201ENST00000604992 2389 ntBASIC16.46■□□□□ 0.23
FAM228BP0C875 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
FAM228BP0C875 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
FAM228BP0C875 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
FAM228BP0C875 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.22
FAM228BP0C875 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FAM228BP0C875 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
FAM228BP0C875 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM228BP0C875 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.45■□□□□ 0.22
FAM228BP0C875 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FAM228BP0C875 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
FAM228BP0C875 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
FAM228BP0C875 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM228BP0C875 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM228BP0C875 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM228BP0C875 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.45■□□□□ 0.22
FAM228BP0C875 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM228BP0C875 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM228BP0C875 RN7SL618P-201ENST00000477850 296 ntBASIC16.45■□□□□ 0.22
FAM228BP0C875 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.45■□□□□ 0.22
FAM228BP0C875 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM228BP0C875 AC092865.5-201ENST00000545435 363 ntBASIC16.45■□□□□ 0.22
FAM228BP0C875 AL596442.2-201ENST00000610240 980 ntBASIC16.45■□□□□ 0.22
FAM228BP0C875 Z92544.3-201ENST00000624747 417 ntBASIC16.45■□□□□ 0.22
FAM228BP0C875 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
FAM228BP0C875 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.45■□□□□ 0.22
FAM228BP0C875 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.45■□□□□ 0.22
FAM228BP0C875 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms