Protein–RNA interactions for Protein: P04626

ERBB2, Receptor tyrosine-protein kinase erbB-2, humanhuman

Predictions only

Length 1,255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2P04626 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.2■□□□□ 0.18
ERBB2P04626 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERBB2P04626 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERBB2P04626 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.2■□□□□ 0.18
ERBB2P04626 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.2■□□□□ 0.18
ERBB2P04626 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.2■□□□□ 0.18
ERBB2P04626 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.2■□□□□ 0.18
ERBB2P04626 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.2■□□□□ 0.18
ERBB2P04626 AC124283.3-201ENST00000570869 594 ntBASIC16.2■□□□□ 0.18
ERBB2P04626 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ERBB2P04626 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.2■□□□□ 0.18
ERBB2P04626 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
ERBB2P04626 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERBB2P04626 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERBB2P04626 AC007787.1-201ENST00000588095 1583 ntBASIC16.2■□□□□ 0.18
ERBB2P04626 AL138799.1-201ENST00000448213 1675 ntBASIC16.2■□□□□ 0.18
ERBB2P04626 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.2■□□□□ 0.18
ERBB2P04626 PCDHGB8P-201ENST00000502926 1973 ntBASIC16.2■□□□□ 0.18
ERBB2P04626 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERBB2P04626 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
ERBB2P04626 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERBB2P04626 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERBB2P04626 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.2■□□□□ 0.18
ERBB2P04626 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERBB2P04626 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERBB2P04626 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
ERBB2P04626 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERBB2P04626 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERBB2P04626 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
ERBB2P04626 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.19■□□□□ 0.18
ERBB2P04626 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.19■□□□□ 0.18
ERBB2P04626 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.19■□□□□ 0.18
ERBB2P04626 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ERBB2P04626 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
ERBB2P04626 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.19■□□□□ 0.18
ERBB2P04626 AC012508.2-201ENST00000567613 1472 ntBASIC16.19■□□□□ 0.18
ERBB2P04626 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC16.19■□□□□ 0.18
ERBB2P04626 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.19■□□□□ 0.18
ERBB2P04626 AC134915.1-201ENST00000426461 574 ntBASIC16.19■□□□□ 0.18
ERBB2P04626 AL442647.2-201ENST00000429864 857 ntBASIC16.19■□□□□ 0.18
ERBB2P04626 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.19■□□□□ 0.18
ERBB2P04626 RPL13AP25-201ENST00000484130 612 ntBASIC16.19■□□□□ 0.18
ERBB2P04626 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.19■□□□□ 0.18
ERBB2P04626 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.19■□□□□ 0.18
ERBB2P04626 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC16.19■□□□□ 0.18
ERBB2P04626 AC140912.1-201ENST00000577171 1054 ntBASIC16.19■□□□□ 0.18
ERBB2P04626 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 TMEM261P1-201ENST00000604899 340 ntBASIC16.19■□□□□ 0.18
ERBB2P04626 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.19■□□□□ 0.18
ERBB2P04626 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.19■□□□□ 0.18
ERBB2P04626 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ERBB2P04626 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
ERBB2P04626 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ERBB2P04626 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
ERBB2P04626 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC16.19■□□□□ 0.18
ERBB2P04626 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
ERBB2P04626 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
ERBB2P04626 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
ERBB2P04626 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.19■□□□□ 0.18
ERBB2P04626 AC093525.8-201ENST00000624099 1342 ntBASIC16.19■□□□□ 0.18
ERBB2P04626 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
ERBB2P04626 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.18■□□□□ 0.18
ERBB2P04626 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
ERBB2P04626 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 C1QBPP1-201ENST00000400117 770 ntBASIC16.18■□□□□ 0.18
ERBB2P04626 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
ERBB2P04626 CRB3P1-201ENST00000449338 276 ntBASIC16.18■□□□□ 0.18
ERBB2P04626 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
ERBB2P04626 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.18■□□□□ 0.18
ERBB2P04626 AC004066.1-201ENST00000502488 802 ntBASIC16.18■□□□□ 0.18
ERBB2P04626 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.18■□□□□ 0.18
ERBB2P04626 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms