Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
CD74P04233 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.01□□□□□ -0.33
CD74P04233 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
CD74P04233 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.01□□□□□ -0.33
CD74P04233 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.01□□□□□ -0.33
CD74P04233 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.01□□□□□ -0.33
CD74P04233 AC104457.1-201ENST00000401024 814 ntBASIC13.01□□□□□ -0.33
CD74P04233 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.01□□□□□ -0.33
CD74P04233 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC13.01□□□□□ -0.33
CD74P04233 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC13.01□□□□□ -0.33
CD74P04233 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.01□□□□□ -0.33
CD74P04233 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.01□□□□□ -0.33
CD74P04233 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC13.01□□□□□ -0.33
CD74P04233 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.01□□□□□ -0.33
CD74P04233 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.01□□□□□ -0.33
CD74P04233 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.01□□□□□ -0.33
CD74P04233 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
CD74P04233 AC025580.3-201ENST00000617932 1424 ntBASIC13.01□□□□□ -0.33
CD74P04233 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC13.01□□□□□ -0.33
CD74P04233 AC007787.1-201ENST00000588095 1583 ntBASIC13.01□□□□□ -0.33
CD74P04233 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.01□□□□□ -0.33
CD74P04233 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CD74P04233 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CD74P04233 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC13.01□□□□□ -0.33
CD74P04233 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CD74P04233 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
CD74P04233 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CD74P04233 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13□□□□□ -0.33
CD74P04233 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
CD74P04233 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13□□□□□ -0.33
CD74P04233 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13□□□□□ -0.33
CD74P04233 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13□□□□□ -0.33
CD74P04233 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13□□□□□ -0.33
CD74P04233 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13□□□□□ -0.33
CD74P04233 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC13□□□□□ -0.33
CD74P04233 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13□□□□□ -0.33
CD74P04233 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
CD74P04233 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC13□□□□□ -0.33
CD74P04233 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13□□□□□ -0.33
CD74P04233 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC13□□□□□ -0.33
CD74P04233 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13□□□□□ -0.33
CD74P04233 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
CD74P04233 AL645728.2-202ENST00000641679 227 ntBASIC13□□□□□ -0.33
CD74P04233 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CD74P04233 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13□□□□□ -0.33
CD74P04233 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13□□□□□ -0.33
CD74P04233 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CD74P04233 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.99□□□□□ -0.33
CD74P04233 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
CD74P04233 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.99□□□□□ -0.33
CD74P04233 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CD74P04233 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CD74P04233 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms