Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.89■□□□□ 0.13
TOP3BO95985 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TOP3BO95985 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TOP3BO95985 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TOP3BO95985 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TOP3BO95985 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TOP3BO95985 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
TOP3BO95985 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TOP3BO95985 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.89■□□□□ 0.13
TOP3BO95985 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC15.89■□□□□ 0.13
TOP3BO95985 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TOP3BO95985 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.89■□□□□ 0.13
TOP3BO95985 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
TOP3BO95985 AL512361.1-201ENST00000554200 418 ntBASIC15.89■□□□□ 0.13
TOP3BO95985 AL079307.3-201ENST00000556114 283 ntBASIC15.89■□□□□ 0.13
TOP3BO95985 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC15.89■□□□□ 0.13
TOP3BO95985 AL133215.2-201ENST00000609242 977 ntBASIC15.89■□□□□ 0.13
TOP3BO95985 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.89■□□□□ 0.13
TOP3BO95985 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TOP3BO95985 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.89■□□□□ 0.13
TOP3BO95985 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TOP3BO95985 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.89■□□□□ 0.13
TOP3BO95985 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TOP3BO95985 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TOP3BO95985 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TOP3BO95985 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TOP3BO95985 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.89■□□□□ 0.13
TOP3BO95985 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TOP3BO95985 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TOP3BO95985 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TOP3BO95985 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
TOP3BO95985 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.89■□□□□ 0.13
TOP3BO95985 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TOP3BO95985 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.88■□□□□ 0.13
TOP3BO95985 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.88■□□□□ 0.13
TOP3BO95985 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.88■□□□□ 0.13
TOP3BO95985 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 BNIP3P1-202ENST00000550043 1585 ntBASIC15.88■□□□□ 0.13
TOP3BO95985 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 AC023908.3-201ENST00000564211 3047 ntBASIC15.88■□□□□ 0.13
TOP3BO95985 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TOP3BO95985 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.88■□□□□ 0.13
TOP3BO95985 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 HLA-H-201ENST00000383620 1096 ntBASIC15.88■□□□□ 0.13
TOP3BO95985 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.88■□□□□ 0.13
TOP3BO95985 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC15.88■□□□□ 0.13
TOP3BO95985 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC15.88■□□□□ 0.13
TOP3BO95985 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 AC099548.2-209ENST00000480264 625 ntBASIC15.88■□□□□ 0.13
TOP3BO95985 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TOP3BO95985 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.88■□□□□ 0.13
TOP3BO95985 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.88■□□□□ 0.13
TOP3BO95985 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 AL583810.1-201ENST00000553344 1045 ntBASIC15.88■□□□□ 0.13
TOP3BO95985 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.88■□□□□ 0.13
TOP3BO95985 AC105021.1-202ENST00000570572 669 ntBASIC15.88■□□□□ 0.13
TOP3BO95985 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.88■□□□□ 0.13
TOP3BO95985 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.88■□□□□ 0.13
TOP3BO95985 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
TOP3BO95985 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.88■□□□□ 0.13
TOP3BO95985 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
TOP3BO95985 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
TOP3BO95985 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.88■□□□□ 0.13
TOP3BO95985 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
TOP3BO95985 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC15.88■□□□□ 0.13
TOP3BO95985 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 FLII-221ENST00000578558 2377 ntTSL 5 BASIC15.87■□□□□ 0.13
TOP3BO95985 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
TOP3BO95985 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.87■□□□□ 0.13
TOP3BO95985 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
TOP3BO95985 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.87■□□□□ 0.13
TOP3BO95985 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC15.87■□□□□ 0.13
TOP3BO95985 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.87■□□□□ 0.13
TOP3BO95985 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.87■□□□□ 0.13
TOP3BO95985 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
TOP3BO95985 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 365.1 ms