Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12.67□□□□□ -0.38
SSSCA1O60232 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.67□□□□□ -0.38
SSSCA1O60232 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
SSSCA1O60232 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SSSCA1O60232 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SSSCA1O60232 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC12.67□□□□□ -0.38
SSSCA1O60232 MPI-203ENST00000535694 1523 ntTSL 2 BASIC12.67□□□□□ -0.38
SSSCA1O60232 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
SSSCA1O60232 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SSSCA1O60232 AC131212.3-201ENST00000624087 4219 ntBASIC12.67□□□□□ -0.38
SSSCA1O60232 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.66□□□□□ -0.38
SSSCA1O60232 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 BEND3P1-201ENST00000421591 1944 ntBASIC12.66□□□□□ -0.38
SSSCA1O60232 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.66□□□□□ -0.38
SSSCA1O60232 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC12.66□□□□□ -0.38
SSSCA1O60232 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.66□□□□□ -0.38
SSSCA1O60232 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.66□□□□□ -0.38
SSSCA1O60232 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 IGLL3P-201ENST00000412472 434 ntBASIC12.66□□□□□ -0.38
SSSCA1O60232 PHKG1P2-201ENST00000457537 863 ntBASIC12.66□□□□□ -0.38
SSSCA1O60232 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 AC098859.1-201ENST00000502915 1238 ntBASIC12.66□□□□□ -0.38
SSSCA1O60232 NMU-203ENST00000507338 658 ntTSL 3 BASIC12.66□□□□□ -0.38
SSSCA1O60232 CCDC74BP1-201ENST00000508880 1123 ntBASIC12.66□□□□□ -0.38
SSSCA1O60232 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC12.66□□□□□ -0.38
SSSCA1O60232 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC12.66□□□□□ -0.38
SSSCA1O60232 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.66□□□□□ -0.38
SSSCA1O60232 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC12.66□□□□□ -0.38
SSSCA1O60232 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.66□□□□□ -0.38
SSSCA1O60232 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC12.66□□□□□ -0.38
SSSCA1O60232 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SSSCA1O60232 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
SSSCA1O60232 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.66□□□□□ -0.38
SSSCA1O60232 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SSSCA1O60232 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 REXO1L2P-201ENST00000425429 2069 ntBASIC12.66□□□□□ -0.38
SSSCA1O60232 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
SSSCA1O60232 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 ARHGAP23P1-201ENST00000562773 1937 ntBASIC12.66□□□□□ -0.38
SSSCA1O60232 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
SSSCA1O60232 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 AL031595.1-201ENST00000623969 4709 ntBASIC12.66□□□□□ -0.38
SSSCA1O60232 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.66□□□□□ -0.38
SSSCA1O60232 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
SSSCA1O60232 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SSSCA1O60232 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 E2F7-201ENST00000322886 5740 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC12.65□□□□□ -0.38
SSSCA1O60232 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.38
SSSCA1O60232 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SSSCA1O60232 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SSSCA1O60232 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 KRT8P37-201ENST00000451609 1420 ntBASIC12.65□□□□□ -0.38
SSSCA1O60232 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SSSCA1O60232 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SSSCA1O60232 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms