Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
PDE6DO43924 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
PDE6DO43924 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
PDE6DO43924 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
PDE6DO43924 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
PDE6DO43924 GOLGA8VP-201ENST00000559009 1798 ntBASIC12.02□□□□□ -0.48
PDE6DO43924 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.02□□□□□ -0.48
PDE6DO43924 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.02□□□□□ -0.48
PDE6DO43924 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
PDE6DO43924 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
PDE6DO43924 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.02□□□□□ -0.48
PDE6DO43924 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
PDE6DO43924 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
PDE6DO43924 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC12.02□□□□□ -0.48
PDE6DO43924 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.02□□□□□ -0.48
PDE6DO43924 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
PDE6DO43924 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.02□□□□□ -0.49
PDE6DO43924 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 GHSR-202ENST00000427970 912 ntBASIC12.02□□□□□ -0.49
PDE6DO43924 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC12.02□□□□□ -0.49
PDE6DO43924 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC12.02□□□□□ -0.49
PDE6DO43924 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.02□□□□□ -0.49
PDE6DO43924 AL078644.1-201ENST00000609881 752 ntBASIC12.02□□□□□ -0.49
PDE6DO43924 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.02□□□□□ -0.49
PDE6DO43924 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC12.02□□□□□ -0.49
PDE6DO43924 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.02□□□□□ -0.49
PDE6DO43924 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.02□□□□□ -0.49
PDE6DO43924 AC055811.4-201ENST00000624039 1754 ntBASIC12.02□□□□□ -0.49
PDE6DO43924 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
PDE6DO43924 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC12.02□□□□□ -0.49
PDE6DO43924 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
PDE6DO43924 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.01□□□□□ -0.49
PDE6DO43924 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 CICP11-201ENST00000434745 2827 ntBASIC12.01□□□□□ -0.49
PDE6DO43924 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
PDE6DO43924 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC12.01□□□□□ -0.49
PDE6DO43924 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.01□□□□□ -0.49
PDE6DO43924 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
PDE6DO43924 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC12.01□□□□□ -0.49
PDE6DO43924 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC12.01□□□□□ -0.49
PDE6DO43924 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 LAGE3P1-201ENST00000425356 484 ntBASIC12.01□□□□□ -0.49
PDE6DO43924 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.01□□□□□ -0.49
PDE6DO43924 KRT18P57-201ENST00000443599 1254 ntBASIC12.01□□□□□ -0.49
PDE6DO43924 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.01□□□□□ -0.49
PDE6DO43924 TPT1P11-201ENST00000458482 498 ntBASIC12.01□□□□□ -0.49
PDE6DO43924 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.01□□□□□ -0.49
PDE6DO43924 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC12.01□□□□□ -0.49
PDE6DO43924 AP000867.3-201ENST00000524675 377 ntBASIC12.01□□□□□ -0.49
PDE6DO43924 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC12.01□□□□□ -0.49
PDE6DO43924 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC12.01□□□□□ -0.49
PDE6DO43924 AC024267.1-201ENST00000582320 895 ntBASIC12.01□□□□□ -0.49
PDE6DO43924 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC12.01□□□□□ -0.49
PDE6DO43924 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
PDE6DO43924 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
PDE6DO43924 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
PDE6DO43924 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
PDE6DO43924 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
PDE6DO43924 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.01□□□□□ -0.49
PDE6DO43924 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC12.01□□□□□ -0.49
PDE6DO43924 AC138969.3-201ENST00000546612 1459 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms