Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.6■□□□□ 0.09
KDELR3O43731 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.6■□□□□ 0.09
KDELR3O43731 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
KDELR3O43731 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
KDELR3O43731 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.6■□□□□ 0.09
KDELR3O43731 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
KDELR3O43731 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC15.6■□□□□ 0.09
KDELR3O43731 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.6■□□□□ 0.09
KDELR3O43731 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.6■□□□□ 0.09
KDELR3O43731 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
KDELR3O43731 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
KDELR3O43731 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
KDELR3O43731 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.59■□□□□ 0.09
KDELR3O43731 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.59■□□□□ 0.09
KDELR3O43731 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.59■□□□□ 0.09
KDELR3O43731 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 AC005229.1-201ENST00000392885 409 ntBASIC15.59■□□□□ 0.09
KDELR3O43731 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.59■□□□□ 0.09
KDELR3O43731 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
KDELR3O43731 ACTBP8-201ENST00000403258 1108 ntBASIC15.59■□□□□ 0.09
KDELR3O43731 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.59■□□□□ 0.09
KDELR3O43731 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.59■□□□□ 0.09
KDELR3O43731 HLA-K-203ENST00000430151 1046 ntBASIC15.59■□□□□ 0.09
KDELR3O43731 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.59■□□□□ 0.09
KDELR3O43731 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.59■□□□□ 0.09
KDELR3O43731 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.59■□□□□ 0.09
KDELR3O43731 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.59■□□□□ 0.09
KDELR3O43731 AC106886.1-201ENST00000568660 600 ntBASIC15.59■□□□□ 0.09
KDELR3O43731 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.59■□□□□ 0.09
KDELR3O43731 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.59■□□□□ 0.09
KDELR3O43731 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.59■□□□□ 0.09
KDELR3O43731 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
KDELR3O43731 AC239800.4-201ENST00000603712 296 ntBASIC15.59■□□□□ 0.09
KDELR3O43731 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
KDELR3O43731 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.59■□□□□ 0.09
KDELR3O43731 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.59■□□□□ 0.09
KDELR3O43731 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 AP000845.1-201ENST00000581677 2131 ntBASIC15.59■□□□□ 0.09
KDELR3O43731 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.59■□□□□ 0.09
KDELR3O43731 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.59■□□□□ 0.09
KDELR3O43731 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
KDELR3O43731 KRT8P14-201ENST00000414254 1442 ntBASIC15.59■□□□□ 0.09
KDELR3O43731 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
KDELR3O43731 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
KDELR3O43731 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC15.59■□□□□ 0.09
KDELR3O43731 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.58■□□□□ 0.09
KDELR3O43731 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
KDELR3O43731 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
KDELR3O43731 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.09
KDELR3O43731 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
KDELR3O43731 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
KDELR3O43731 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
KDELR3O43731 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.58■□□□□ 0.09
KDELR3O43731 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC15.58■□□□□ 0.08
KDELR3O43731 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
KDELR3O43731 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
KDELR3O43731 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KDELR3O43731 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.58■□□□□ 0.08
KDELR3O43731 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
KDELR3O43731 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.58■□□□□ 0.08
KDELR3O43731 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
KDELR3O43731 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
KDELR3O43731 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC15.58■□□□□ 0.08
KDELR3O43731 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.58■□□□□ 0.08
KDELR3O43731 AL355864.2-201ENST00000447420 863 ntBASIC15.58■□□□□ 0.08
KDELR3O43731 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
KDELR3O43731 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.58■□□□□ 0.08
KDELR3O43731 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.58■□□□□ 0.08
KDELR3O43731 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
KDELR3O43731 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
KDELR3O43731 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms